VTR
2 main matches found
(4 matches in total )Execution time: 10.0 seconds
Match RMSD = 0.88
VTR = 0.03
Average AVD = 0.63 Å
Parameters
Chains(7BWJ.pdb ): E versus L
Chains(7BWJ_africa_mut.pdb ) E versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A7BWJ | 636 | 3 | 0 | 2 | 0 | 1 | 0 | 6 |
| B7BWJ_africa_mut | 636 | 2 | 1 | 1 | 0 | 0 | 0 | 4 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| E-L | E-L | V483 | Y32 | V483 | Y32 | Hydrophobic | Hydrophobic | 0.29 | View |
| E-L | E-L | E484 | E52 | K484 | E52 | Repulsive | Attractive | 1.68 | View |
| E-L | E-L | V483 | Y32 | V483 | Y32 | Hydrophobic | Hydrophobic | 0.21 | View |
| E-L | E-L | E484 | N33 | K484 | N33 | Hydrogen Bonds | Hydrogen Bonds | 0.35 | View |