Execution time: 10.0 seconds
Match RMSD = 0.6
VTR = 0.02
Average AVD = 0.44 Å
Chains(7BEP.pdb ): E versus A
Chains(7BEP_africa_mut.pdb ) E versus A
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7BEP | 2175 | 28 | 8 | 7 | 0 | 0 | 1 | 44 |
B7BEP_africa_mut | 2175 | 31 | 0 | 2 | 0 | 4 | 1 | 38 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
E-A | E-A | L455 | F104 | L455 | F104 | Hydrophobic | Hydrophobic | 0.42 | View |
E-A | E-A | F490 | H56 | F490 | H56 | Hydrophobic | Hydrophobic | 0.39 | View |
E-A | E-A | E484 | W107 | K484 | W107 | Hydrophobic | Hydrophobic | 0.87 | View |
E-A | E-A | F456 | F104 | F456 | F104 | Hydrophobic | Hydrophobic | 0.17 | View |
E-A | E-A | E484 | Y59 | K484 | Y59 | Hydrogen Bonds | Hydrogen Bonds | 0.28 | View |
E-A | E-A | E484 | R52 | K484 | R52 | Attractive Hydrogen Bonds | Repulsive | 1.46 | View |
E-A | E-A | F490 | H56 | F490 | H56 | Hydrophobic | Hydrophobic | 0.35 | View |
E-A | E-A | L455 | F104 | L455 | F104 | Hydrophobic | Hydrophobic | 0.49 | View |
E-A | E-A | V483 | Y59 | V483 | Y59 | Hydrophobic | Hydrophobic | 0.17 | View |
E-A | E-A | F456 | L105 | F456 | L105 | Hydrophobic | Hydrophobic | 0.31 | View |
E-A | E-A | V483 | Y59 | V483 | Y59 | Hydrophobic | Hydrophobic | 0.17 | View |
E-A | E-A | F456 | L105 | F456 | L105 | Hydrophobic | Hydrophobic | 0.3 | View |
E-A | E-A | F490 | T57 | F490 | T57 | Hydrophobic | Hydrophobic | 0.19 | View |
E-A | E-A | E484 | R52 | K484 | R52 | Attractive Hydrogen Bonds | Repulsive | 1.5 | View |
E-A | E-A | E484 | R52 | K484 | R52 | Attractive | Repulsive | 1.46 | View |
E-A | E-A | F490 | H56 | F490 | H56 | Hydrophobic | Hydrophobic | 0.35 | View |
E-A | E-A | V483 | Y59 | V483 | Y59 | Hydrophobic | Hydrophobic | 0.17 | View |
E-A | E-A | E484 | R52 | K484 | R52 | Attractive | Repulsive | 1.53 | View |
E-A | E-A | V483 | Y59 | V483 | Y59 | Hydrophobic | Hydrophobic | 0.17 | View |
E-A | E-A | F456 | F104 | F456 | F104 | Hydrophobic | Hydrophobic | 0.18 | View |
E-A | E-A | E484 | Y59 | K484 | Y59 | Hydrophobic | Hydrophobic | 0.55 | View |
E-A | E-A | F490 | T57 | F490 | T57 | Hydrophobic | Hydrophobic | 0.25 | View |
E-A | E-A | E484 | W107 | K484 | W107 | Hydrophobic | Hydrophobic | 0.82 | View |
E-A | E-A | V483 | Y59 | V483 | Y59 | Hydrophobic | Hydrophobic | 0.18 | View |
E-A | E-A | F490 | H56 | F490 | H56 | Hydrophobic | Hydrophobic | 0.29 | View |
E-A | E-A | L455 | F104 | L455 | F104 | Hydrophobic | Hydrophobic | 0.21 | View |
E-A | E-A | F486 | W107 | F486 | W107 | Hydrophobic | Hydrophobic | 0.11 | View |
E-A | E-A | F486 | W107 | F486 | W107 | Hydrophobic | Hydrophobic | 0.19 | View |
E-A | E-A | Y489 | L105 | Y489 | L105 | Hydrophobic | Hydrophobic | 0.49 | View |
E-A | E-A | F490 | T57 | F490 | T57 | Hydrophobic | Hydrophobic | 0.21 | View |
E-A | E-A | F486 | W107 | F486 | W107 | Hydrophobic | Hydrophobic | 0.16 | View |
E-A | E-A | F490 | T57 | F490 | T57 | Hydrophobic | Hydrophobic | 0.23 | View |
E-A | E-A | V483 | Y59 | V483 | Y59 | Hydrophobic | Hydrophobic | 0.18 | View |
E-A | E-A | F490 | H56 | F490 | H56 | Aromatic Stacking | Aromatic Stacking | 0.35 | View |
E-A | E-A | G482 | Y59 | G482 | Y59 | Hydrogen Bonds | Hydrogen Bonds | 0.21 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7BEP | E-A | E484 | Y50 | Hydrogen Bonds | 2.76 | View |
7BEP | E-A | E484 | R52 | Attractive, Hydrogen Bonds | 3.45 | View |
7BEP | E-A | E484 | R52 | Attractive | 4.67 | View |
7BEP | E-A | E484 | R52 | Attractive | 5.06 | View |
7BEP | E-A | E484 | R52 | Attractive | 5.74 | View |
7BEP | E-A | E484 | T57 | Hydrogen Bonds | 2.83 | View |
7BEP_africa_mut | E-A | L455 | F104 | Hydrophobic | 4.21 | View |
7BEP_africa_mut | E-A | L455 | F104 | Hydrophobic | 4.40 | View |
7BEP_africa_mut | E-A | Y489 | L105 | Hydrophobic | 4.21 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |