VTR

19 main matches found (24 matches in total )

Execution time: 9.0 seconds

Match RMSD = 0.32

VTR = 0.0

Average AVD = 0.3 Å

Parameters

Chains(7BEL.pdb ): R versus B

Chains(7BEL_africa_mut.pdb ) R versus B

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7BEL 1728 5 9 13 0 0 0 27
B7BEL_africa_mut 1728 5 10 13 0 0 0 28

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
R-B R-B R357 Y49 R357 Y49 Hydrophobic Hydrophobic 0.15 View
R-B R-B R357 E55 R357 E55 Attractive Attractive 0.31 View
R-B R-B R357 E55 R357 E55 Attractive Attractive 0.26 View
R-B R-B R466 Y32 R466 Y32 Hydrogen Bonds Hydrogen Bonds 0.14 View
R-B R-B R357 Y49 R357 Y49 Hydrophobic Hydrophobic 0.17 View
R-B R-B N354 Y32 N354 Y32 Hydrogen Bonds Hydrogen Bonds 0.4 View
R-B R-B R357 E55 R357 E55 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.45 View
R-B R-B R357 D50 R357 D50 Hydrogen Bonds Hydrogen Bonds 0.4 View
R-B R-B S359 Y49 S359 Y49 Hydrogen Bonds Hydrogen Bonds 0.22 View
R-B R-B R357 Y49 R357 Y49 Hydrophobic Hydrophobic 0.15 View
R-B R-B S359 Y49 S359 Y49 Hydrogen Bonds Hydrogen Bonds 0.29 View
R-B R-B R357 E55 R357 E55 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.42 View
R-B R-B N360 T56 N360 T56 Hydrogen Bonds Hydrogen Bonds 0.4 View
R-B R-B N360 T56 N360 T56 Hydrogen Bonds Hydrogen Bonds 0.4 View
R-B R-B R355 Y32 R355 Y32 Hydrogen Bonds Hydrogen Bonds 0.1 View
R-B R-B S359 Y49 S359 Y49 Hydrogen Bonds Hydrogen Bonds 0.3 View
R-B R-B R357 Y49 R357 Y49 Hydrophobic Hydrophobic 0.17 View
R-B R-B R466 D92 R466 D92 Attractive Attractive 0.28 View
R-B R-B R357 E55 R357 E55 Attractive Attractive 0.33 View
R-B R-B T523 T56 T523 T56 Hydrophobic Hydrophobic 0.51 View
R-B R-B R357 E55 R357 E55 Attractive Attractive 0.29 View
R-B R-B R357 E55 R357 E55 Attractive Attractive 0.34 View
R-B R-B R357 E55 R357 E55 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.36 View
R-B R-B R357 Y49 R357 Y49 Hydrogen Bonds Hydrogen Bonds 0.29 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7BEL | 7BEL_africa_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact
7BEL_africa_mut R-B R466 D92 Attractive 5.61 View

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph