Execution time: 10.0 seconds
Match RMSD = 0.43
VTR = 0.01
Average AVD = 0.36 Å
Chains(7BEJ.pdb ): E versus H
Chains(7BEJ_africa_mut.pdb ) E versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7BEJ | 623 | 8 | 0 | 16 | 0 | 0 | 1 | 25 |
B7BEJ_africa_mut | 623 | 9 | 0 | 20 | 0 | 0 | 1 | 30 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
H-E | H-E | Y33 | L455 | Y33 | L455 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
H-E | H-E | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.29 | View |
H-E | H-E | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.29 | View |
H-E | H-E | R97 | Y489 | R97 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.13 | View |
H-E | H-E | Y52 | Y421 | Y52 | Y421 | Hydrophobic | Hydrophobic | 0.73 | View |
H-E | H-E | S56 | D420 | S56 | D420 | Hydrogen Bonds | Hydrogen Bonds | 0.24 | View |
H-E | H-E | Y33 | F456 | Y33 | F456 | Aromatic Stacking | Aromatic Stacking | 0.28 | View |
H-E | H-E | R97 | Y489 | R97 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.14 | View |
H-E | H-E | V2 | F486 | V2 | F486 | Hydrophobic | Hydrophobic | 0.26 | View |
H-E | H-E | Y33 | L455 | Y33 | L455 | Hydrophobic | Hydrophobic | 0.25 | View |
H-E | H-E | G26 | N487 | G26 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.38 | View |
H-E | H-E | T28 | S477 | T28 | S477 | Hydrogen Bonds | Hydrogen Bonds | 0.36 | View |
H-E | H-E | R97 | N487 | R97 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.13 | View |
H-E | H-E | V2 | F486 | V2 | F486 | Hydrophobic | Hydrophobic | 0.28 | View |
H-E | H-E | T28 | G476 | T28 | G476 | Hydrogen Bonds | Hydrogen Bonds | 0.44 | View |
H-E | H-E | G54 | Y421 | G54 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.35 | View |
H-E | H-E | S31 | Y473 | S31 | Y473 | Hydrogen Bonds | Hydrogen Bonds | 0.39 | View |
H-E | H-E | S56 | D420 | S56 | D420 | Hydrogen Bonds | Hydrogen Bonds | 0.17 | View |
H-E | H-E | Y52 | K417 | Y52 | N417 | Hydrophobic | Hydrophobic | 1.25 | View |
H-E | H-E | R97 | N487 | R97 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.11 | View |
H-E | H-E | G26 | S477 | G26 | S477 | Hydrogen Bonds | Hydrogen Bonds | 0.19 | View |
H-E | H-E | T28 | A475 | T28 | A475 | Hydrogen Bonds | Hydrogen Bonds | 0.59 | View |
H-E | H-E | N32 | A475 | N32 | A475 | Hydrogen Bonds | Hydrogen Bonds | 0.58 | View |
H-E | H-E | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.29 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7BEJ | H-E | G100 | K417 | Hydrogen Bonds | 2.50 | View |
7BEJ_africa_mut | H-E | T28 | A475 | Hydrogen Bonds | 3.24 | View |
7BEJ_africa_mut | H-E | S31 | Y473 | Hydrogen Bonds | 3.84 | View |
7BEJ_africa_mut | H-E | S31 | Q474 | Hydrogen Bonds | 3.88 | View |
7BEJ_africa_mut | H-E | S31 | A475 | Hydrogen Bonds | 3.85 | View |
7BEJ_africa_mut | H-E | Y33 | N417 | Hydrogen Bonds | 3.09 | View |
7BEJ_africa_mut | H-E | Y33 | F456 | Hydrophobic | 4.38 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |