Execution time: 95.0 seconds
Match RMSD = 0.49
VTR = 0.02
Average AVD = 0.48 Å
Chains(7A29.pdb ): A versus D
Chains(7A29_africa_mut.pdb ) A versus D
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7A29 | 3510 | 29 | 1 | 7 | 0 | 3 | 1 | 41 |
B7A29_africa_mut | 3501 | 37 | 1 | 8 | 0 | 5 | 1 | 52 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-D | A-D | L452 | Y52 | L452 | Y52 | Hydrophobic | Hydrophobic | 0.55 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.43 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.47 | View |
A-D | A-D | N450 | Q99 | N450 | Q99 | Hydrogen Bonds | Hydrogen Bonds | 0.66 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.48 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.44 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.42 | View |
A-D | A-D | T470 | W57 | T470 | W57 | Hydrophobic | Hydrophobic | 0.69 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.4 | View |
A-D | A-D | N450 | H35 | N450 | H35 | Hydrogen Bonds | Hydrogen Bonds | 0.54 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.38 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.49 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.53 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.39 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.42 | View |
A-D | A-D | K444 | R45 | K444 | R45 | Repulsive | Repulsive | 0.51 | View |
A-D | A-D | F490 | L59 | F490 | L59 | Hydrophobic | Hydrophobic | 0.32 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.4 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.51 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.39 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.36 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.43 | View |
A-D | A-D | V445 | R45 | V445 | R45 | Hydrogen Bonds | Hydrogen Bonds | 0.38 | View |
A-D | A-D | N450 | E32 | N450 | E32 | Hydrogen Bonds | Hydrogen Bonds | 0.64 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.44 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Aromatic Stacking | Aromatic Stacking | 0.44 | View |
A-D | A-D | Y449 | Y52 | Y449 | Y52 | Hydrogen Bonds | Hydrogen Bonds | 0.66 | View |
A-D | A-D | K444 | R45 | K444 | R45 | Repulsive | Repulsive | 0.47 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.4 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.43 | View |
A-D | A-D | G447 | Y37 | G447 | Y37 | Hydrogen Bonds | Hydrogen Bonds | 0.26 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.4 | View |
A-D | A-D | K444 | R45 | K444 | R45 | Repulsive | Repulsive | 0.56 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.36 | View |
A-D | A-D | L452 | Y52 | L452 | Y52 | Hydrophobic | Hydrophobic | 0.54 | View |
A-D | A-D | Y449 | W47 | Y449 | W47 | Hydrophobic | Hydrophobic | 0.37 | View |
A-D | A-D | L452 | Y52 | L452 | Y52 | Hydrophobic | Hydrophobic | 0.55 | View |
A-D | A-D | T470 | W57 | T470 | W57 | Hydrophobic | Hydrophobic | 0.7 | View |
A-D | A-D | K444 | E105 | K444 | E105 | Attractive | Attractive | 0.52 | View |
A-D | A-D | K444 | Y37 | K444 | Y37 | Hydrogen Bonds | Hydrogen Bonds | 0.52 | View |
A-D | A-D | L452 | Y52 | L452 | Y52 | Hydrophobic | Hydrophobic | 0.65 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7A29_africa_mut | A-D | K444 | R45 | Repulsive | 5.75 | View |
7A29_africa_mut | A-D | K444 | W103 | Hydrophobic | 4.20 | View |
7A29_africa_mut | A-D | Y449 | W47 | Hydrophobic | 4.35 | View |
7A29_africa_mut | A-D | Y449 | W47 | Hydrophobic | 4.44 | View |
7A29_africa_mut | A-D | Y449 | W47 | Hydrophobic | 4.45 | View |
7A29_africa_mut | A-D | Y449 | W47 | Hydrophobic | 4.47 | View |
7A29_africa_mut | A-D | T470 | W57 | Hydrogen Bonds | 3.41 | View |
7A29_africa_mut | A-D | T470 | W57 | Hydrophobic | 4.31 | View |
7A29_africa_mut | A-D | T470 | W57 | Hydrophobic | 4.03 | View |
7A29_africa_mut | A-D | T470 | W57 | Hydrophobic | 3.75 | View |
7A29_africa_mut | A-D | K484 | K65 | Repulsive | 5.24 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |