Execution time: 28.0 seconds
Match RMSD = 0.5
VTR = 0.01
Average AVD = 0.47 Å
Chains(6ZDH.pdb ): C versus G
Chains(6ZDH_africa_mut.pdb ) C versus G
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A6ZDH | 4308 | 24 | 2 | 9 | 0 | 0 | 0 | 35 |
B6ZDH_africa_mut | 4299 | 28 | 2 | 10 | 0 | 0 | 0 | 40 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
C-G | C-G | D389 | Y53 | D389 | Y53 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
C-G | C-G | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.53 | View |
C-G | C-G | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.66 | View |
C-G | C-G | Y369 | N57 | Y369 | N57 | Hydrophobic | Hydrophobic | 0.15 | View |
C-G | C-G | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.66 | View |
C-G | C-G | T385 | Y106 | T385 | Y106 | Hydrogen Bonds | Hydrogen Bonds | 0.39 | View |
C-G | C-G | S383 | Y106 | S383 | Y106 | Hydrogen Bonds | Hydrogen Bonds | 0.4 | View |
C-G | C-G | T385 | Y59 | T385 | Y59 | Hydrophobic | Hydrophobic | 0.5 | View |
C-G | C-G | T385 | N57 | T385 | N57 | Hydrophobic | Hydrophobic | 0.36 | View |
C-G | C-G | K386 | L103 | K386 | L103 | Hydrogen Bonds | Hydrogen Bonds | 0.53 | View |
C-G | C-G | Y369 | N57 | Y369 | N57 | Hydrophobic | Hydrophobic | 0.16 | View |
C-G | C-G | V382 | W104 | V382 | W104 | Hydrophobic | Hydrophobic | 0.35 | View |
C-G | C-G | V382 | W104 | V382 | W104 | Hydrophobic | Hydrophobic | 0.33 | View |
C-G | C-G | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.73 | View |
C-G | C-G | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.66 | View |
C-G | C-G | T385 | D33 | T385 | D33 | Hydrogen Bonds | Hydrogen Bonds | 0.66 | View |
C-G | C-G | K529 | D54 | K529 | D54 | Attractive | Attractive | 0.41 | View |
C-G | C-G | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.52 | View |
C-G | C-G | T385 | Y59 | T385 | Y59 | Hydrophobic | Hydrophobic | 0.5 | View |
C-G | C-G | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.53 | View |
C-G | C-G | V382 | W104 | V382 | W104 | Hydrophobic | Hydrophobic | 0.33 | View |
C-G | C-G | V382 | W104 | V382 | W104 | Hydrophobic | Hydrophobic | 0.38 | View |
C-G | C-G | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.71 | View |
C-G | C-G | V382 | W104 | V382 | W104 | Hydrophobic | Hydrophobic | 0.36 | View |
C-G | C-G | K386 | D99 | K386 | D99 | Attractive | Attractive | 0.56 | View |
C-G | C-G | S383 | W104 | S383 | W104 | Hydrogen Bonds | Hydrogen Bonds | 0.61 | View |
C-G | C-G | K386 | G101 | K386 | G101 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
C-G | C-G | S383 | W104 | S383 | W104 | Hydrogen Bonds | Hydrogen Bonds | 0.44 | View |
C-G | C-G | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.47 | View |
C-G | C-G | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.47 | View |
C-G | C-G | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.73 | View |
C-G | C-G | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.27 | View |
C-G | C-G | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.68 | View |
C-G | C-G | F374 | K65 | F374 | K65 | Hydrogen Bonds | Hydrogen Bonds | 0.26 | View |
C-G | C-G | V382 | W104 | V382 | W104 | Hydrophobic | Hydrophobic | 0.33 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
6ZDH_africa_mut | C-G | Y369 | N57 | Hydrophobic | 3.90 | View |
6ZDH_africa_mut | C-G | Y369 | N57 | Hydrophobic | 4.48 | View |
6ZDH_africa_mut | C-G | Y369 | Y59 | Hydrophobic | 4.36 | View |
6ZDH_africa_mut | C-G | K386 | K102 | Hydrogen Bonds | 3.82 | View |
6ZDH_africa_mut | C-G | L390 | W104 | Hydrophobic | 4.11 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |