Execution time: 28.0 seconds
Match RMSD = 0.59
VTR = 0.01
Average AVD = 0.49 Å
Chains(6ZDH.pdb ): B versus D
Chains(6ZDH_africa_mut.pdb ) B versus D
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A6ZDH | 4308 | 17 | 2 | 11 | 0 | 0 | 1 | 31 |
B6ZDH_africa_mut | 4299 | 19 | 3 | 13 | 0 | 0 | 1 | 36 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-D | B-D | L517 | W104 | L517 | W104 | Hydrophobic | Hydrophobic | 0.47 | View |
B-D | B-D | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.79 | View |
B-D | B-D | K386 | D99 | K386 | D99 | Attractive | Attractive | 1.25 | View |
B-D | B-D | T385 | Y106 | T385 | Y106 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
B-D | B-D | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.54 | View |
B-D | B-D | F374 | K65 | F374 | K65 | Hydrogen Bonds | Hydrogen Bonds | 0.28 | View |
B-D | B-D | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.2 | View |
B-D | B-D | F377 | Y59 | F377 | Y59 | Hydrophobic | Hydrophobic | 0.24 | View |
B-D | B-D | T385 | Y106 | T385 | Y106 | Hydrogen Bonds | Hydrogen Bonds | 0.52 | View |
B-D | B-D | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.55 | View |
B-D | B-D | F377 | Y59 | F377 | Y59 | Aromatic Stacking | Aromatic Stacking | 0.23 | View |
B-D | B-D | N388 | Y53 | N388 | Y53 | Hydrogen Bonds | Hydrogen Bonds | 0.6 | View |
B-D | B-D | K386 | V105 | K386 | V105 | Hydrogen Bonds | Hydrogen Bonds | 1.05 | View |
B-D | B-D | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.54 | View |
B-D | B-D | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.19 | View |
B-D | B-D | S383 | W104 | S383 | W104 | Hydrogen Bonds | Hydrogen Bonds | 0.48 | View |
B-D | B-D | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.72 | View |
B-D | B-D | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.12 | View |
B-D | B-D | F377 | Y59 | F377 | Y59 | Hydrophobic | Hydrophobic | 0.19 | View |
B-D | B-D | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.19 | View |
B-D | B-D | K386 | L103 | K386 | L103 | Hydrogen Bonds | Hydrogen Bonds | 1.17 | View |
B-D | B-D | T385 | N57 | T385 | N57 | Hydrophobic | Hydrophobic | 0.19 | View |
B-D | B-D | T385 | D33 | T385 | D33 | Hydrogen Bonds | Hydrogen Bonds | 0.64 | View |
B-D | B-D | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.11 | View |
B-D | B-D | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.75 | View |
B-D | B-D | S383 | W104 | S383 | W104 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
B-D | B-D | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.2 | View |
B-D | B-D | S383 | Y106 | S383 | Y106 | Hydrogen Bonds | Hydrogen Bonds | 0.19 | View |
B-D | B-D | K386 | D99 | K386 | D99 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 1.12 | View |
B-D | B-D | L517 | W104 | L517 | W104 | Hydrophobic | Hydrophobic | 0.52 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
6ZDH_africa_mut | B-D | Y369 | N57 | Hydrophobic | 4.42 | View |
6ZDH_africa_mut | B-D | S375 | K65 | Hydrogen Bonds | 3.51 | View |
6ZDH_africa_mut | B-D | K386 | D33 | Attractive | 5.94 | View |
6ZDH_africa_mut | B-D | K386 | W104 | Hydrophobic | 4.26 | View |
6ZDH_africa_mut | B-D | K386 | W104 | Hydrogen Bonds | 2.95 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |