Execution time: 29.0 seconds
Match RMSD = 0.51
VTR = 0.01
Average AVD = 0.47 Å
Chains(6ZDH.pdb ): A versus H
Chains(6ZDH_africa_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A6ZDH | 4308 | 23 | 4 | 11 | 0 | 0 | 1 | 39 |
B6ZDH_africa_mut | 4299 | 25 | 4 | 13 | 0 | 0 | 1 | 43 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-H | A-H | K386 | L103 | K386 | L103 | Hydrogen Bonds | Hydrogen Bonds | 0.6 | View |
A-H | A-H | V382 | W104 | V382 | W104 | Hydrophobic | Hydrophobic | 0.33 | View |
A-H | A-H | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.77 | View |
A-H | A-H | K386 | D33 | K386 | D33 | Attractive | Attractive | 0.87 | View |
A-H | A-H | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.26 | View |
A-H | A-H | K529 | D54 | K529 | D54 | Attractive | Attractive | 0.4 | View |
A-H | A-H | V382 | W104 | V382 | W104 | Hydrophobic | Hydrophobic | 0.39 | View |
A-H | A-H | T385 | Y106 | T385 | Y106 | Hydrogen Bonds | Hydrogen Bonds | 0.2 | View |
A-H | A-H | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.42 | View |
A-H | A-H | S383 | W104 | S383 | W104 | Hydrogen Bonds | Hydrogen Bonds | 0.26 | View |
A-H | A-H | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.45 | View |
A-H | A-H | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.35 | View |
A-H | A-H | L517 | W104 | L517 | W104 | Hydrophobic | Hydrophobic | 0.55 | View |
A-H | A-H | T385 | Y106 | T385 | Y106 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
A-H | A-H | T385 | Y59 | T385 | Y59 | Hydrophobic | Hydrophobic | 0.21 | View |
A-H | A-H | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.76 | View |
A-H | A-H | T385 | Y59 | T385 | Y59 | Hydrophobic | Hydrophobic | 0.21 | View |
A-H | A-H | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.74 | View |
A-H | A-H | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.18 | View |
A-H | A-H | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.26 | View |
A-H | A-H | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.43 | View |
A-H | A-H | L517 | W104 | L517 | W104 | Hydrophobic | Hydrophobic | 0.59 | View |
A-H | A-H | S383 | W104 | S383 | W104 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
A-H | A-H | K386 | D99 | K386 | D99 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.71 | View |
A-H | A-H | T385 | V50 | T385 | V50 | Hydrophobic | Hydrophobic | 0.52 | View |
A-H | A-H | F377 | Y59 | F377 | Y59 | Hydrophobic | Hydrophobic | 0.37 | View |
A-H | A-H | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.44 | View |
A-H | A-H | F377 | Y59 | F377 | Y59 | Aromatic Stacking | Aromatic Stacking | 0.31 | View |
A-H | A-H | T385 | D33 | T385 | D33 | Hydrogen Bonds | Hydrogen Bonds | 0.73 | View |
A-H | A-H | S383 | Y106 | S383 | Y106 | Hydrogen Bonds | Hydrogen Bonds | 0.15 | View |
A-H | A-H | K386 | D99 | K386 | D99 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.75 | View |
A-H | A-H | T385 | N57 | T385 | N57 | Hydrophobic | Hydrophobic | 0.25 | View |
A-H | A-H | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.42 | View |
A-H | A-H | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.78 | View |
A-H | A-H | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.71 | View |
A-H | A-H | K386 | V105 | K386 | V105 | Hydrogen Bonds | Hydrogen Bonds | 0.66 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
6ZDH | A-H | D389 | Y53 | Hydrogen Bonds | 3.88 | View |
6ZDH_africa_mut | A-H | Y369 | N57 | Hydrophobic | 4.41 | View |
6ZDH_africa_mut | A-H | Y369 | N57 | Hydrophobic | 4.49 | View |
6ZDH_africa_mut | A-H | Y369 | N57 | Hydrogen Bonds | 3.88 | View |
6ZDH_africa_mut | A-H | S375 | K65 | Hydrogen Bonds | 3.71 | View |
6ZDH_africa_mut | A-H | K386 | W104 | Hydrogen Bonds | 3.40 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |