Execution time: 14.0 seconds
Match RMSD = 0.45
VTR = 0.01
Average AVD = 0.39 Å
Chains(6ZDG.pdb ): A versus B
Chains(6ZDG_africa_mut.pdb ) A versus B
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A6ZDG | 1884 | 19 | 2 | 9 | 0 | 0 | 1 | 31 |
B6ZDG_africa_mut | 1884 | 28 | 2 | 9 | 0 | 0 | 1 | 40 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-B | A-B | T385 | Y59 | T385 | Y59 | Hydrophobic | Hydrophobic | 0.12 | View |
A-B | A-B | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.14 | View |
A-B | A-B | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.81 | View |
A-B | A-B | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.57 | View |
A-B | A-B | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.81 | View |
A-B | A-B | V382 | W104 | V382 | W104 | Hydrophobic | Hydrophobic | 0.35 | View |
A-B | A-B | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.61 | View |
A-B | A-B | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.21 | View |
A-B | A-B | T385 | Y59 | T385 | Y59 | Hydrophobic | Hydrophobic | 0.11 | View |
A-B | A-B | L517 | W104 | L517 | W104 | Hydrophobic | Hydrophobic | 0.67 | View |
A-B | A-B | T385 | Y106 | T385 | Y106 | Hydrogen Bonds | Hydrogen Bonds | 0.38 | View |
A-B | A-B | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.73 | View |
A-B | A-B | V382 | W104 | V382 | W104 | Hydrophobic | Hydrophobic | 0.51 | View |
A-B | A-B | K386 | L103 | K386 | L103 | Hydrogen Bonds | Hydrogen Bonds | 0.51 | View |
A-B | A-B | T385 | N57 | T385 | N57 | Hydrophobic | Hydrophobic | 0.17 | View |
A-B | A-B | F377 | Y59 | F377 | Y59 | Hydrophobic | Hydrophobic | 0.28 | View |
A-B | A-B | T385 | N57 | T385 | N57 | Hydrogen Bonds | Hydrogen Bonds | 0.13 | View |
A-B | A-B | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.74 | View |
A-B | A-B | K386 | G101 | K386 | G101 | Hydrogen Bonds | Hydrogen Bonds | 0.37 | View |
A-B | A-B | S375 | K65 | S375 | K65 | Hydrogen Bonds | Hydrogen Bonds | 0.33 | View |
A-B | A-B | F377 | Y59 | F377 | Y59 | Aromatic Stacking | Aromatic Stacking | 0.23 | View |
A-B | A-B | T385 | D33 | T385 | D33 | Hydrogen Bonds | Hydrogen Bonds | 0.58 | View |
A-B | A-B | Y369 | N57 | Y369 | N57 | Hydrogen Bonds | Hydrogen Bonds | 0.17 | View |
A-B | A-B | K378 | D62 | K378 | D62 | Attractive | Attractive | 0.53 | View |
A-B | A-B | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.17 | View |
A-B | A-B | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.31 | View |
A-B | A-B | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.16 | View |
A-B | A-B | F377 | Y59 | F377 | Y59 | Hydrophobic | Hydrophobic | 0.22 | View |
A-B | A-B | K386 | D99 | K386 | D99 | Attractive | Attractive | 0.44 | View |
A-B | A-B | S383 | W104 | S383 | W104 | Hydrogen Bonds | Hydrogen Bonds | 0.37 | View |
A-B | A-B | S383 | W104 | S383 | W104 | Hydrogen Bonds | Hydrogen Bonds | 0.38 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
6ZDG_africa_mut | A-B | Y369 | N57 | Hydrophobic | 4.18 | View |
6ZDG_africa_mut | A-B | Y369 | N57 | Hydrophobic | 4.33 | View |
6ZDG_africa_mut | A-B | V382 | W104 | Hydrophobic | 4.20 | View |
6ZDG_africa_mut | A-B | K386 | W104 | Hydrophobic | 4.11 | View |
6ZDG_africa_mut | A-B | K386 | W104 | Hydrophobic | 4.36 | View |
6ZDG_africa_mut | A-B | L390 | W104 | Hydrophobic | 4.29 | View |
6ZDG_africa_mut | A-B | L390 | W104 | Hydrophobic | 3.86 | View |
6ZDG_africa_mut | A-B | F392 | W104 | Hydrophobic | 4.48 | View |
6ZDG_africa_mut | A-B | L517 | W104 | Hydrophobic | 4.36 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |