Execution time: 8.0 seconds
Match RMSD = 0.5
VTR = 0.0
Average AVD = 0.48 Å
Chains(6XKQ.pdb ): A versus L
Chains(6XKQ_africa_mut.pdb ) A versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A6XKQ | 569 | 20 | 0 | 9 | 0 | 0 | 3 | 32 |
B6XKQ_africa_mut | 569 | 21 | 0 | 10 | 0 | 0 | 3 | 34 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-L | A-L | Q493 | H31 | Q493 | H31 | Hydrogen Bonds | Hydrogen Bonds | 0.54 | View |
A-L | A-L | F486 | Y49 | F486 | Y49 | Hydrophobic | Hydrophobic | 0.24 | View |
A-L | A-L | F486 | Y49 | F486 | Y49 | Hydrophobic | Hydrophobic | 0.37 | View |
A-L | A-L | F486 | Y49 | F486 | Y49 | Hydrophobic | Hydrophobic | 0.33 | View |
A-L | A-L | L455 | F32 | L455 | F32 | Hydrophobic | Hydrophobic | 0.55 | View |
A-L | A-L | Q498 | N69 | Q498 | N69 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
A-L | A-L | F486 | V46 | F486 | V46 | Hydrophobic | Hydrophobic | 0.69 | View |
A-L | A-L | Q498 | N69 | Q498 | N69 | Hydrogen Bonds | Hydrogen Bonds | 0.5 | View |
A-L | A-L | F456 | F32 | F456 | F32 | Hydrophobic | Hydrophobic | 0.52 | View |
A-L | A-L | F456 | F32 | F456 | F32 | Hydrophobic | Hydrophobic | 0.43 | View |
A-L | A-L | F486 | Y49 | F486 | Y49 | Hydrophobic | Hydrophobic | 0.47 | View |
A-L | A-L | Q493 | H31 | Q493 | H31 | Hydrogen Bonds | Hydrogen Bonds | 0.56 | View |
A-L | A-L | Y489 | F32 | Y489 | F32 | Hydrophobic | Hydrophobic | 0.51 | View |
A-L | A-L | F486 | Y49 | F486 | Y49 | Hydrophobic | Hydrophobic | 0.28 | View |
A-L | A-L | Y449 | H31 | Y449 | H31 | Aromatic Stacking | Aromatic Stacking | 0.74 | View |
A-L | A-L | L455 | F32 | L455 | F32 | Hydrophobic | Hydrophobic | 0.46 | View |
A-L | A-L | Y449 | G68 | Y449 | G68 | Hydrogen Bonds | Hydrogen Bonds | 0.71 | View |
A-L | A-L | F486 | Y49 | F486 | Y49 | Hydrogen Bonds | Hydrogen Bonds | 0.56 | View |
A-L | A-L | Q493 | A29 | Q493 | A29 | Hydrogen Bonds | Hydrogen Bonds | 0.63 | View |
A-L | A-L | F486 | Y49 | F486 | Y49 | Aromatic Stacking | Aromatic Stacking | 0.37 | View |
A-L | A-L | F486 | Y49 | F486 | Y49 | Hydrophobic | Hydrophobic | 0.38 | View |
A-L | A-L | L455 | Y30 | L455 | Y30 | Hydrophobic | Hydrophobic | 0.48 | View |
A-L | A-L | F456 | F32 | F456 | F32 | Hydrophobic | Hydrophobic | 0.39 | View |
A-L | A-L | G446 | G68 | G446 | G68 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
A-L | A-L | Y489 | F32 | Y489 | F32 | Hydrophobic | Hydrophobic | 0.58 | View |
A-L | A-L | F486 | V46 | F486 | V46 | Hydrophobic | Hydrophobic | 0.72 | View |
A-L | A-L | F486 | Y49 | F486 | Y49 | Hydrophobic | Hydrophobic | 0.38 | View |
A-L | A-L | G446 | S67 | G446 | S67 | Hydrogen Bonds | Hydrogen Bonds | 0.53 | View |
A-L | A-L | F486 | Y49 | F486 | Y49 | Hydrophobic | Hydrophobic | 0.33 | View |
A-L | A-L | Y489 | F32 | Y489 | F32 | Aromatic Stacking | Aromatic Stacking | 0.29 | View |
A-L | A-L | F486 | Y49 | F486 | Y49 | Hydrophobic | Hydrophobic | 0.33 | View |
A-L | A-L | F486 | V46 | F486 | V46 | Hydrophobic | Hydrophobic | 0.57 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |