Execution time: 11.0 seconds
Match RMSD = 0.4
VTR = 0.01
Average AVD = 0.38 Å
Chains(6XDG.pdb ): E versus B
Chains(6XDG_africa_mut.pdb ) E versus B
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A6XDG | 1043 | 43 | 2 | 11 | 0 | 0 | 4 | 60 |
B6XDG_africa_mut | 1043 | 43 | 0 | 9 | 0 | 0 | 4 | 56 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.27 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.32 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.29 | View |
E-B | E-B | A475 | M104 | A475 | M104 | Hydrophobic | Hydrophobic | 0.88 | View |
E-B | E-B | F486 | Y50 | F486 | Y50 | Hydrophobic | Hydrophobic | 0.35 | View |
E-B | E-B | Y489 | Y33 | Y489 | Y33 | Hydrophobic | Hydrophobic | 0.42 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.26 | View |
E-B | E-B | L455 | D31 | L455 | D31 | Hydrophobic | Hydrophobic | 0.59 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.31 | View |
E-B | E-B | Y489 | Y33 | Y489 | Y33 | Hydrophobic | Hydrophobic | 0.35 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.28 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.26 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.35 | View |
E-B | E-B | Y453 | D31 | Y453 | D31 | Hydrogen Bonds | Hydrogen Bonds | 0.46 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.23 | View |
E-B | E-B | L455 | D31 | L455 | D31 | Hydrophobic | Hydrophobic | 0.53 | View |
E-B | E-B | F486 | Y50 | F486 | Y50 | Hydrophobic | Hydrophobic | 0.36 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.29 | View |
E-B | E-B | E484 | Y53 | K484 | Y53 | Hydrogen Bonds | Hydrogen Bonds | 0.93 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.29 | View |
E-B | E-B | F486 | Y59 | F486 | Y59 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
E-B | E-B | Y489 | Y33 | Y489 | Y33 | Hydrophobic | Hydrophobic | 0.39 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.21 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.34 | View |
E-B | E-B | Y489 | Y33 | Y489 | Y33 | Hydrophobic | Hydrophobic | 0.36 | View |
E-B | E-B | Y489 | Y33 | Y489 | Y33 | Hydrophobic | Hydrophobic | 0.38 | View |
E-B | E-B | G485 | Y33 | G485 | Y33 | Hydrogen Bonds | Hydrogen Bonds | 0.42 | View |
E-B | E-B | F486 | Y59 | F486 | Y59 | Hydrophobic | Hydrophobic | 0.44 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.23 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.36 | View |
E-B | E-B | F486 | Y59 | F486 | Y59 | Hydrophobic | Hydrophobic | 0.36 | View |
E-B | E-B | F486 | Y50 | F486 | Y50 | Hydrophobic | Hydrophobic | 0.36 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.21 | View |
E-B | E-B | F486 | Y59 | F486 | Y59 | Aromatic Stacking | Aromatic Stacking | 0.33 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.31 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.26 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.37 | View |
E-B | E-B | F486 | R100 | F486 | R100 | Hydrogen Bonds | Hydrogen Bonds | 0.64 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.4 | View |
E-B | E-B | F486 | Y50 | F486 | Y50 | Hydrophobic | Hydrophobic | 0.37 | View |
E-B | E-B | Y489 | Y33 | Y489 | Y33 | Aromatic Stacking | Aromatic Stacking | 0.27 | View |
E-B | E-B | F486 | Y50 | F486 | Y50 | Aromatic Stacking | Aromatic Stacking | 0.37 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.28 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Aromatic Stacking | Aromatic Stacking | 0.25 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.28 | View |
E-B | E-B | Y489 | Y33 | Y489 | Y33 | Hydrophobic | Hydrophobic | 0.38 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.31 | View |
E-B | E-B | L455 | D31 | L455 | D31 | Hydrophobic | Hydrophobic | 0.8 | View |
E-B | E-B | F486 | Y59 | F486 | Y59 | Hydrophobic | Hydrophobic | 0.4 | View |
E-B | E-B | F486 | Y59 | F486 | Y59 | Hydrophobic | Hydrophobic | 0.4 | View |
E-B | E-B | C488 | Y33 | C488 | Y33 | Hydrogen Bonds | Hydrogen Bonds | 0.36 | View |
E-B | E-B | Y489 | Y33 | Y489 | Y33 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
E-B | E-B | Y489 | Y53 | Y489 | Y53 | Hydrophobic | Hydrophobic | 0.41 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
6XDG | E-B | K417 | D31 | Attractive | 5.77 | View |
6XDG | E-B | K417 | D31 | Attractive, Hydrogen Bonds | 3.84 | View |
6XDG | E-B | K417 | T102 | Hydrogen Bonds | 3.68 | View |
6XDG | E-B | E484 | Y53 | Hydrogen Bonds | 3.23 | View |
6XDG | E-B | E484 | S56 | Hydrogen Bonds | 2.94 | View |
6XDG | E-B | E484 | T57 | Hydrophobic | 4.45 | View |
6XDG_africa_mut | E-B | Y489 | S30 | Hydrogen Bonds | 3.84 | View |
6XDG_africa_mut | E-B | Y489 | D31 | Hydrogen Bonds | 3.23 | View |
6XDG_africa_mut | E-B | Q498 | A75 | Hydrophobic | 4.35 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |