Execution time: 11.0 seconds
Match RMSD = 0.81
VTR = 0.09
Average AVD = 0.76 Å
Chains(6W41.pdb ): C versus L
Chains(6W41_africa_mut.pdb ) C versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A6W41 | 626 | 13 | 2 | 1 | 0 | 0 | 0 | 16 |
B6W41_africa_mut | 626 | 17 | 2 | 2 | 0 | 0 | 0 | 21 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
L-C | L-C | W50 | V382 | W50 | V382 | Hydrophobic | Hydrophobic | 0.94 | View |
L-C | L-C | W50 | V382 | W50 | V382 | Hydrophobic | Hydrophobic | 0.82 | View |
L-C | L-C | W50 | L390 | W50 | L390 | Hydrophobic | Hydrophobic | 1.15 | View |
L-C | L-C | Y32 | G381 | Y32 | G381 | Hydrogen Bonds | Hydrogen Bonds | 0.94 | View |
L-C | L-C | W50 | V382 | W50 | V382 | Hydrophobic | Hydrophobic | 0.81 | View |
L-C | L-C | E55 | K386 | E55 | K386 | Attractive | Attractive | 0.45 | View |
L-C | L-C | E55 | K386 | E55 | K386 | Attractive | Attractive | 0.56 | View |
L-C | L-C | W50 | L390 | W50 | L390 | Hydrophobic | Hydrophobic | 1.13 | View |
L-C | L-C | Y49 | K386 | Y49 | K386 | Hydrophobic | Hydrophobic | 0.11 | View |
L-C | L-C | W50 | V382 | W50 | V382 | Hydrophobic | Hydrophobic | 0.65 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
6W41 | L-C | I28 | F392 | Hydrophobic | 4.48 | View |
6W41 | L-C | I28 | F392 | Hydrophobic | 4.27 | View |
6W41 | L-C | I28 | F392 | Hydrophobic | 4.41 | View |
6W41 | L-C | I28 | F392 | Hydrophobic | 4.39 | View |
6W41 | L-C | I28 | T430 | Hydrophobic | 3.59 | View |
6W41 | L-C | I28 | L517 | Hydrophobic | 3.84 | View |
6W41_africa_mut | L-C | K30 | L517 | Hydrophobic | 3.35 | View |
6W41_africa_mut | L-C | K30 | L517 | Hydrophobic | 3.71 | View |
6W41_africa_mut | L-C | Y49 | D389 | Hydrogen Bonds | 3.51 | View |
6W41_africa_mut | L-C | W50 | V382 | Hydrophobic | 4.22 | View |
6W41_africa_mut | L-C | W50 | L390 | Hydrophobic | 3.99 | View |
6W41_africa_mut | L-C | W50 | L390 | Hydrophobic | 4.15 | View |
6W41_africa_mut | L-C | W50 | L390 | Hydrophobic | 4.15 | View |
6W41_africa_mut | L-C | W50 | L390 | Hydrophobic | 4.18 | View |
6W41_africa_mut | L-C | W50 | F392 | Hydrophobic | 4.49 | View |
6W41_africa_mut | L-C | W50 | F392 | Hydrophobic | 4.29 | View |
6W41_africa_mut | L-C | W50 | F392 | Hydrophobic | 3.77 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |