3DRI-B-A

PDB Title CRYSTAL STRUCTURE OF LACTOCOCCAL OPPA CO-CRYSTALLIZED WITH AN OCTAMER PEPTIDE IN AN OPEN CONFORMATION
Resolution (Å) 1.800
Classification PEPTIDE BINDING PROTEIN

Protein

Description Oligopeptide-binding protein oppA
Organism Lactococcus lactis
Chain A
Length 559
Binding Area (Å2) 348.43
Molecular Weight 61705.49
Aromaticity 0.11
Instability 25.37
Isoelectric Point 8.15
Sequence LKAGNFDVAYQNPDKAIKGGNLKVAYQSDSPMKAQWLSGLSNDATFATMSGPGGGQDGLFFTDSGFKFIKGGAADVALDKESKTATITLRKDLKWSDGSEVTAKDYEFTYETIANPAYGSDRWTDSLANIVGLSDYHTGKAKTISGITFPDGENGKVIKVQFKEMKPGMTQSGNGYFLETVAPYQYLKDVAPKDLASSPKTTTKPLVTGPFKPENVVAGESIKYVPNPYYWGEKPKLNSITYEVVSTAKSVAALSSSKYDIINGMVSSQYKQVKNLKGYKVLGQQAMYISLMYYNLGHYDAKNSINVQDRKTPLQDQNVRQAIGYARNVAEVDNKFSNGLSTPANSLIPPIFKQFTSSSVKGYEKQDLDKANKLLDEDGWKLNKSTGYREKDGKELSLVYAARVGDANAETIAQNYIQQWKKIGVKVSLYNGKLMEFNSWVDHMTTPPGANDWDITDGSWSLASEPSQQDLFSAAAPYNFGHFNDSEITKDLNDIDSAKSENPTYRKAAFVKYQEDMNKKAYVIPTNFMLNYTPVNKRVVGMTLDYGAMNTWSEIGVSS

Peptide

Description peptide AASASA
Organism -
Chain B
Length 6
Binding Area (Å2) 391.15
Hydrophobic (% a.a.)
66%
Molecular Weight 476.48
Aromaticity 0.00
Instability 8.33
Isoelectric Point 5.57
Sequence AASASA

Clustering Classification

Sequence cluster S 11
Contact cluster C1129
Interface cluster I200

Similar complexes

Is the complex classified in the same cluster?

Complex Sequence cluster
(S11) 		Contact cluster
(C1129) 		Interface cluster
(I200)
3drh-B-A
3drj-B-A
3drk-B-A
2pq4-B-A
2wjg-C-A
3fs1-B-A
4c2f-C-A
4naq-B-A
1hsa-C-A
1hsa-F-D