3D1E-P-A

PDB Title CRYSTAL STRUCTURE OF E. COLI SLIDING CLAMP (BETA) BOUND TO A POLYMERASE II PEPTIDE
Resolution (Å) 1.900
Classification TRANSFERASE, TRANSCRIPTION

Peptide

Description decamer from polymerase II C-terminal
Organism -
Chain P
Length 6
Binding Area (Å2) 620.96
Hydrophobic (% a.a.)
83%
Molecular Weight 633.74
Aromaticity 0.17
Instability 8.33
Isoelectric Point 5.52
Sequence GQLGLF

Protein

Description DNA polymerase III subunit beta
Organism Escherichia coli
Chain A
Length 366
Binding Area (Å2) 412.01
Molecular Weight 40586.16
Aromaticity 0.06
Instability 42.49
Isoelectric Point 5.25
Sequence MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL

Clustering Classification

Sequence cluster S 1215
Contact cluster C50
Interface cluster I49

Similar complexes

Is the complex classified in the same cluster?

Complex Sequence cluster
(S1215) 		Contact cluster
(C50) 		Interface cluster
(I49)
3q4j-H-B
3q4j-I-C
3q4j-J-D
3q4j-K-E
3q4j-L-F
4k3o-E-A
4k3p-E-A
4k3q-E-A
4k3r-E-A
4k74-C-A
4k74-D-B
1ok7-C-B
4k3m-E-A
©2026 LBS | Created by Diego Mariano and Pedro Martins | Maintained by LBS I.T. team.