5B56-F-B

PDB Title CRYSTAL STRUCTURE OF HIV-1 VPR C-TERMINAL DOMAIN AND DIBB-M-IMPORTIN- ALPHA2 COMPLEX
Resolution (Å) 2.300
Classification PROTEIN TRANSPORT/VIRAL PROTEIN

Protein

Description Importin subunit alpha-1
Organism Mus musculus
Chain B
Length 432
Binding Area (Å2) 645.36
Molecular Weight 46844.24
Aromaticity 0.05
Instability 40.27
Isoelectric Point 5.18
Sequence QGTVNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYKASLNLIEKYFSVEEEE

Peptide

Description Protein Vpr
Organism Human immunodeficiency virus 1
Chain F
Length 12
Binding Area (Å2) 733.23
Hydrophobic (% a.a.)
16%
Molecular Weight 1388.49
Aromaticity 0.00
Instability 63.63
Isoelectric Point 12.30
Sequence QQRRTRNGASKS

Clustering Classification

Sequence cluster S 704
Contact cluster C5
Interface cluster I7

Similar complexes

Is the complex classified in the same cluster?

Complex Sequence cluster
(S704) 		Contact cluster
(C5) 		Interface cluster
(I7)
5b56-E-A
1y2a-P-C
3ul0-C-B
6bwa-B-A
3ul1-A-B
4ba3-B-A
6bwb-B-A
2ynr-B-A
3uvu-B-A
4bpl-B-A
5huy-A-C
5w41-B-A
6iu7-B-A
4bqk-C-B
5k9s-B-A
5w4e-A-B
6iua-B-A
3zin-C-A
4bqk-D-A
5e6q-A-B
5klr-A-B
5w4f-A-B
3zio-C-A
4mz5-C-E
5ekf-C-A
5svz-B-A
3l3q-B-A
5fc8-C-E
5w4g-A-B
3zip-C-A
4mz6-C-E
5gxw-B-A
5u5p-B-A
5wum-C-A
1ee5-B-A
3oqs-B-A
3ziq-B-A
4oih-B-A
5u5r-B-A
1pjm-A-B
5wun-C-A
1pjn-A-B
3rz9-B-A
5h2x-B-A
5umz-D-B
5x8n-B-A
3zir-C-A
4wv6-B-A
5v5o-A-C
6bvv-B-A
1q1s-B-C
3ukx-C-B
5h43-C-A
6bw0-C-E
3uky-C-B
5hhg-C-E
5v5p-A-C
6bw1-C-E
1q1t-B-C
3ukz-C-B
4yi0-A-C
5huw-A-C
6bw9-B-A
4b8p-D-B
4zdu-B-A
5huw-B-C
5vqi-A-B
2c1m-B-A
5huy-B-C
5vqi-C-B
5ctt-B-A
2ynr-C-A
3zin-B-A
5d5k-B-C
2yns-C-A
5k9s-C-A
5w4e-D-B
6k06-A-C
1ee4-C-A
2yns-D-B
3zio-B-A
4mz5-A-E
5ekf-B-A
6mjl-A-B
1ee4-D-A
3knd-B-A
5w4f-D-B
6p6a-A-B
1ee4-E-B
3zip-B-A
4mz6-A-E
5u5p-C-A
6p6a-C-B
1ee4-F-B
3l3q-C-A
6p6e-B-A
5h2w-B-A
5wun-B-A
6p6e-C-A
3q5u-B-A
3ziq-C-A
4rxh-A-B
5h2w-D-C
5umz-E-B
3zir-B-A
4rxh-C-B
1q1s-A-C
3tpm-B-A
5h43-B-A
4b8o-B-A
4wv6-C-A
5v5o-B-C
1q1t-A-C
4b8o-C-A
4xzr-A-B
4b8p-C-A
5v5p-B-C