VIRAL PROTEIN, IMMUNE SYSTEM
EM STRUCTURE OF SARS-COV-2 SPIKE GLYCOPROTEIN (ONE RBD UP) IN COMPLEX WITH COVOX-159:

0 - C GLN 14 OE1  VS D THR 28 N   
Distance: 4.329245 - Hydrogen Bonds, 
1 - C GLN 14 CB   VS D TYR 32 CD1 
Distance: 5.387112 - Hydrophobic, 
2 - C GLN 14 CB   VS D TYR 32 CE1 
Distance: 4.512988 - Hydrophobic, 
3 - C GLN 14 CB   VS D TYR 32 CE2 
Distance: 4.665130 - Hydrophobic, 
4 - C GLN 14 CG   VS D TYR 32 CE1 
Distance: 4.949562 - Hydrophobic, 
5 - C GLN 14 OE1  VS D TYR 32 OH  
Distance: 2.971392 - Hydrogen Bonds, 
6 - C GLN 14 NE2  VS D TYR 32 OH  
Distance: 4.822027 - Hydrogen Bonds, 
7 - C TYR 144 CG   VS D TYR 53 CG  
Distance: 5.368896 - Aromatic Stacking, 
8 - C TYR 144 CG   VS D TYR 53 CE1 
Distance: 5.447467 - Hydrophobic, 
9 - C TYR 144 CG   VS D TYR 53 CE2 
Distance: 5.230396 - Hydrophobic, 
10 - C TYR 144 CD1  VS D TYR 53 CE1 
Distance: 5.283375 - Hydrophobic, 
11 - C TYR 144 CD1  VS D TYR 53 CE2 
Distance: 4.772088 - Hydrophobic, 
12 - C TYR 144 CD2  VS D TYR 53 CE2 
Distance: 5.124153 - Hydrophobic, 
13 - C TYR 144 CE1  VS D TYR 53 CE1 
Distance: 5.312784 - Hydrophobic, 
14 - C TYR 144 CE1  VS D TYR 53 CE2 
Distance: 4.180608 - Hydrophobic, 
15 - C TYR 144 CE2  VS D TYR 53 CE2 
Distance: 4.574322 - Hydrophobic, 
16 - C TYR 144 OH   VS D TYR 53 OH  
Distance: 4.298573 - Hydrogen Bonds, 
17 - C TYR 145 O    VS D TYR 53 OH  
Distance: 3.934302 - Hydrogen Bonds, 
18 - C HIS 146 CG   VS D TYR 53 CG  
Distance: 6.844151 - Aromatic Stacking, 
19 - C HIS 146 N    VS D ASP 54 OD2 
Distance: 4.815707 - Hydrogen Bonds, 
20 - C HIS 146 CB   VS D ASP 54 CB  
Distance: 5.329168 - Hydrophobic, 
21 - C HIS 146 ND1  VS D ASP 54 OD1 
Distance: 6.149815 - Attractive, 
22 - C HIS 146 ND1  VS D ASP 54 OD2 
Distance: 4.762929 - Attractive, Hydrogen Bonds, 
23 - C HIS 146 NE2  VS D ASP 54 O   
Distance: 4.270618 - Hydrogen Bonds, 
24 - C HIS 146 NE2  VS D ASP 54 OD1 
Distance: 5.458720 - Attractive, 
25 - C HIS 146 NE2  VS D ASP 54 OD2 
Distance: 4.420621 - Attractive, Hydrogen Bonds, 
26 - C LYS 147 NZ   VS D ASP 54 OD1 
Distance: 6.964390 - Attractive, 
27 - C LYS 147 NZ   VS D GLY 56 O   
Distance: 3.434013 - Hydrogen Bonds, 
28 - C LYS 147 NZ   VS D ASN 57 OD1 
Distance: 2.252051 - Hydrogen Bonds, 
29 - C GLY 252 N    VS D TYR 108 OH  
Distance: 4.558580 - Hydrogen Bonds, 
30 - C GLY 252 O    VS D TYR 108 OH  
Distance: 4.531142 - Hydrogen Bonds, 
31 - C ASP 253 N    VS D TYR 108 OH  
Distance: 2.566213 - Hydrogen Bonds, 
32 - C ASP 253 O    VS D TYR 108 OH  
Distance: 4.436867 - Hydrogen Bonds, 
33 - C ASP 253 CB   VS D TYR 108 CE1 
Distance: 4.865841 - Hydrophobic, 
34 - C ASP 253 CB   VS D TYR 108 CE2 
Distance: 4.907255 - Hydrophobic, 
35 - C ASP 253 OD1  VS D TYR 108 OH  
Distance: 4.784145 - Hydrogen Bonds, 
36 - C ASP 253 OD2  VS D TYR 108 OH  
Distance: 4.047007 - Hydrogen Bonds,