VIRAL PROTEIN, IMMUNE SYSTEM
EM STRUCTURE OF SARS-COV-2 SPIKE GLYCOPROTEIN (ALL RBD DOWN) IN COMPLEX WITH COVOX-159:

0 - A GLN 14 OE1  VS F THR 28 N   
Distance: 4.604275 - Hydrogen Bonds, 
1 - A GLN 14 N    VS F TYR 32 OH  
Distance: 4.801688 - Hydrogen Bonds, 
2 - A GLN 14 CB   VS F TYR 32 CE1 
Distance: 4.549523 - Hydrophobic, 
3 - A GLN 14 CB   VS F TYR 32 CE2 
Distance: 4.538648 - Hydrophobic, 
4 - A GLN 14 CG   VS F TYR 32 CE1 
Distance: 4.958324 - Hydrophobic, 
5 - A GLN 14 OE1  VS F TYR 32 OH  
Distance: 2.454057 - Hydrogen Bonds, 
6 - A GLN 14 NE2  VS F TYR 32 OH  
Distance: 4.526235 - Hydrogen Bonds, 
7 - A GLN 14 N    VS F ARG 100 O   
Distance: 4.899248 - Hydrogen Bonds, 
8 - A TYR 144 CG   VS F TYR 53 CG  
Distance: 5.353864 - Aromatic Stacking, 
9 - A TYR 144 CG   VS F TYR 53 CE1 
Distance: 5.450337 - Hydrophobic, 
10 - A TYR 144 CG   VS F TYR 53 CE2 
Distance: 5.260383 - Hydrophobic, 
11 - A TYR 144 CD1  VS F TYR 53 CE1 
Distance: 5.145388 - Hydrophobic, 
12 - A TYR 144 CD1  VS F TYR 53 CE2 
Distance: 4.638502 - Hydrophobic, 
13 - A TYR 144 CD2  VS F TYR 53 CE2 
Distance: 5.325886 - Hydrophobic, 
14 - A TYR 144 CE1  VS F TYR 53 CD2 
Distance: 5.341176 - Hydrophobic, 
15 - A TYR 144 CE1  VS F TYR 53 CE1 
Distance: 5.194171 - Hydrophobic, 
16 - A TYR 144 CE1  VS F TYR 53 CE2 
Distance: 4.047704 - Hydrophobic, 
17 - A TYR 144 CE2  VS F TYR 53 CE2 
Distance: 4.817841 - Hydrophobic, 
18 - A TYR 144 OH   VS F TYR 53 OH  
Distance: 4.542169 - Hydrogen Bonds, 
19 - A TYR 145 O    VS F TYR 53 OH  
Distance: 3.400443 - Hydrogen Bonds, 
20 - A HIS 146 N    VS F TYR 53 OH  
Distance: 4.751745 - Hydrogen Bonds, 
21 - A HIS 146 CG   VS F TYR 53 CG  
Distance: 6.419414 - Aromatic Stacking, 
22 - A HIS 146 N    VS F ASP 54 OD2 
Distance: 4.702262 - Hydrogen Bonds, 
23 - A HIS 146 CB   VS F ASP 54 CB  
Distance: 5.196496 - Hydrophobic, 
24 - A HIS 146 ND1  VS F ASP 54 OD1 
Distance: 6.123386 - Attractive, 
25 - A HIS 146 ND1  VS F ASP 54 OD2 
Distance: 4.695038 - Attractive, Hydrogen Bonds, 
26 - A HIS 146 NE2  VS F ASP 54 O   
Distance: 4.497178 - Hydrogen Bonds, 
27 - A HIS 146 NE2  VS F ASP 54 OD1 
Distance: 5.585828 - Attractive, 
28 - A HIS 146 NE2  VS F ASP 54 OD2 
Distance: 4.555270 - Attractive, Hydrogen Bonds, 
29 - A LYS 147 N    VS F ASP 54 OD2 
Distance: 4.695560 - Hydrogen Bonds, 
30 - A LYS 147 NZ   VS F ASP 54 OD1 
Distance: 6.602617 - Attractive, 
31 - A LYS 147 NZ   VS F ASP 54 OD2 
Distance: 6.801930 - Attractive, 
32 - A LYS 147 NZ   VS F GLY 56 O   
Distance: 3.418042 - Hydrogen Bonds, 
33 - A LYS 147 NZ   VS F ASN 57 OD1 
Distance: 2.243480 - Hydrogen Bonds, 
34 - A PRO 251 O    VS F TYR 108 OH  
Distance: 4.879249 - Hydrogen Bonds, 
35 - A GLY 252 N    VS F TYR 108 OH  
Distance: 4.510295 - Hydrogen Bonds, 
36 - A GLY 252 O    VS F TYR 108 OH  
Distance: 4.694557 - Hydrogen Bonds, 
37 - A ASP 253 N    VS F TYR 108 OH  
Distance: 2.789815 - Hydrogen Bonds, 
38 - A ASP 253 O    VS F TYR 108 OH  
Distance: 4.777437 - Hydrogen Bonds, 
39 - A ASP 253 CB   VS F TYR 108 CE1 
Distance: 5.071484 - Hydrophobic, 
40 - A ASP 253 CB   VS F TYR 108 CE2 
Distance: 5.013551 - Hydrophobic, 
41 - A ASP 253 OD2  VS F TYR 108 OH  
Distance: 4.189384 - Hydrogen Bonds,