VIRAL PROTEIN, IMMUNE SYSTEM
EM STRUCTURE OF SARS-COV-2 SPIKE GLYCOPROTEIN IN COMPLEX WITH COVOX- 253H165L FAB:

0 - B TYR 473 OH   VS H THR 104 O   
Distance: 3.482502 - Hydrogen Bonds, 
1 - B TYR 473 OH   VS H THR 104 OG1 
Distance: 2.896326 - Hydrogen Bonds, 
2 - B ALA 475 O    VS H SER 105 N   
Distance: 4.640173 - Hydrogen Bonds, 
3 - B ALA 475 O    VS H SER 105 OG  
Distance: 3.362692 - Hydrogen Bonds, 
4 - B ALA 475 O    VS H CYS 106 N   
Distance: 3.773129 - Hydrogen Bonds, 
5 - B ALA 475 CB   VS H CYS 106 CB  
Distance: 5.431004 - Hydrophobic, 
6 - B SER 477 N    VS H ASP 108 OD2 
Distance: 4.245809 - Hydrogen Bonds, 
7 - B SER 477 OG   VS H ASP 108 OD1 
Distance: 4.810565 - Hydrogen Bonds, 
8 - B SER 477 OG   VS H ASP 108 OD2 
Distance: 4.074674 - Hydrogen Bonds, 
9 - B PHE 486 CB   VS H TRP 50 CH2 
Distance: 5.380429 - Hydrophobic, 
10 - B PHE 486 CD1  VS H TRP 50 CZ3 
Distance: 5.126887 - Hydrophobic, 
11 - B PHE 486 CD1  VS H TRP 50 CH2 
Distance: 5.495193 - Hydrophobic, 
12 - B PHE 486 CE1  VS H PRO 99 CB  
Distance: 5.017800 - Hydrophobic, 
13 - B PHE 486 CE1  VS H PRO 99 CG  
Distance: 4.447553 - Hydrophobic, 
14 - B PHE 486 CZ   VS H PRO 99 CB  
Distance: 4.995479 - Hydrophobic, 
15 - B PHE 486 CZ   VS H PRO 99 CG  
Distance: 4.818520 - Hydrophobic, 
16 - B PHE 486 CZ   VS H CYS 106 CB  
Distance: 5.360404 - Hydrophobic, 
17 - B PHE 486 CE2  VS H ASP 108 CB  
Distance: 4.526831 - Hydrophobic, 
18 - B PHE 486 CZ   VS H ASP 108 CB  
Distance: 4.960248 - Hydrophobic, 
19 - B PHE 486 CG   VS H PHE 110 CD2 
Distance: 6.974072 - Aromatic Stacking, 
20 - B ASN 487 OD1  VS H CYS 106 N   
Distance: 4.774901 - Hydrogen Bonds, 
21 - B ASN 487 OD1  VS H CYS 106 SG  
Distance: 4.320940 - Hydrogen Bonds, 
22 - B ASN 487 ND2  VS H CYS 106 O   
Distance: 4.082039 - Hydrogen Bonds, 
23 - B ASN 487 ND2  VS H TYR 107 O   
Distance: 4.005017 - Hydrogen Bonds, 
24 - B ASN 487 ND2  VS H ASP 108 OD2 
Distance: 4.033663 - Hydrogen Bonds, 
25 - B TYR 489 OH   VS H THR 31 O   
Distance: 4.528111 - Hydrogen Bonds, 
26 - B TYR 489 CE1  VS H TRP 50 CZ3 
Distance: 5.441887 - Hydrophobic, 
27 - B TYR 489 CE1  VS H TRP 50 CH2 
Distance: 5.227178 - Hydrophobic, 
28 - B TYR 489 CG   VS H VAL 52 CG1 
Distance: 5.114461 - Hydrophobic, 
29 - B TYR 489 CD1  VS H VAL 52 CB  
Distance: 5.397785 - Hydrophobic, 
30 - B TYR 489 CD1  VS H VAL 52 CG1 
Distance: 4.463588 - Hydrophobic, 
31 - B TYR 489 CD1  VS H VAL 52 CG2 
Distance: 5.025078 - Hydrophobic, 
32 - B TYR 489 CD2  VS H VAL 52 CG1 
Distance: 5.448363 - Hydrophobic, 
33 - B TYR 489 CE1  VS H VAL 52 CB  
Distance: 5.069538 - Hydrophobic, 
34 - B TYR 489 CE1  VS H VAL 52 CG1 
Distance: 4.179801 - Hydrophobic, 
35 - B TYR 489 CE1  VS H VAL 52 CG2 
Distance: 4.610184 - Hydrophobic, 
36 - B TYR 489 CE2  VS H VAL 52 CG1 
Distance: 5.221547 - Hydrophobic,