VIRAL PROTEIN, IMMUNE SYSTEM
STRUCTURE OF SARS-COV-2 S PROTEIN IN COMPLEX WITH N-TERMINAL DOMAIN ANTIBODY DH1052:

0 - X ARG 37 NH2  VS B GLU 654 OE1 
Distance: 6.283343 - Attractive, 
1 - X ARG 37 NH2  VS B GLU 654 OE2 
Distance: 6.823164 - Attractive, 
2 - X THR 39 OG1  VS B SER 689 OG  
Distance: 4.706766 - Hydrogen Bonds, 
3 - X SER 49 OG   VS B GLN 218 O   
Distance: 4.512012 - Hydrogen Bonds, 
4 - X SER 49 OG   VS B GLN 218 OE1 
Distance: 2.777902 - Hydrogen Bonds, 
5 - X SER 49 OG   VS B GLN 218 NE2 
Distance: 3.874781 - Hydrogen Bonds, 
6 - X SER 50 N    VS B GLN 218 OE1 
Distance: 3.517670 - Hydrogen Bonds, 
7 - X SER 50 OG   VS B GLN 218 OE1 
Distance: 4.039674 - Hydrogen Bonds, 
8 - X SER 50 OG   VS B GLN 218 NE2 
Distance: 2.924405 - Hydrogen Bonds, 
9 - X SER 51 N    VS B GLN 218 OE1 
Distance: 2.938359 - Hydrogen Bonds, 
10 - X SER 51 OG   VS B GLN 218 OE1 
Distance: 2.810318 - Hydrogen Bonds, 
11 - X SER 51 OG   VS B GLN 218 NE2 
Distance: 4.053126 - Hydrogen Bonds, 
12 - X TYR 52 CG   VS B PHE 32 CG  
Distance: 5.749633 - Aromatic Stacking, 
13 - X TYR 52 CD1  VS B PHE 32 CZ  
Distance: 5.166859 - Hydrophobic, 
14 - X TYR 52 CE1  VS B PHE 32 CE1 
Distance: 5.109712 - Hydrophobic, 
15 - X TYR 52 CE1  VS B PHE 32 CE2 
Distance: 4.936747 - Hydrophobic, 
16 - X TYR 52 CE1  VS B PHE 32 CZ  
Distance: 4.389469 - Hydrophobic, 
17 - X TYR 52 CE2  VS B PHE 32 CE2 
Distance: 5.452104 - Hydrophobic, 
18 - X TYR 52 CE2  VS B PHE 32 CZ  
Distance: 5.162347 - Hydrophobic, 
19 - X TYR 52 OH   VS B LEU 216 O   
Distance: 3.190326 - Hydrogen Bonds, 
20 - X TYR 52 OH   VS B PRO 217 O   
Distance: 4.803995 - Hydrogen Bonds, 
21 - X TYR 52 N    VS B GLN 218 OE1 
Distance: 4.204757 - Hydrogen Bonds, 
22 - X TYR 52 CG   VS B GLN 218 CB  
Distance: 5.191689 - Hydrophobic, 
23 - X TYR 52 CD1  VS B GLN 218 CB  
Distance: 5.484327 - Hydrophobic, 
24 - X TYR 52 CD2  VS B GLN 218 CB  
Distance: 4.218179 - Hydrophobic, 
25 - X TYR 52 CD2  VS B GLN 218 CG  
Distance: 5.096058 - Hydrophobic, 
26 - X TYR 52 CE1  VS B GLN 218 CB  
Distance: 4.911801 - Hydrophobic, 
27 - X TYR 52 CE2  VS B GLN 218 CB  
Distance: 3.472155 - Hydrophobic, 
28 - X TYR 52 CE2  VS B GLN 218 CG  
Distance: 4.679729 - Hydrophobic, 
29 - X TYR 52 OH   VS B GLN 218 N   
Distance: 2.937307 - Hydrogen Bonds, 
30 - X SER 87 OG   VS B ASN 606 N   
Distance: 3.787210 - Hydrogen Bonds, 
31 - X SER 87 OG   VS B ASN 606 ND2 
Distance: 2.914500 - Hydrogen Bonds, 
32 - X TYR 111 OH   VS B ASN 211 O   
Distance: 4.791505 - Hydrogen Bonds, 
33 - X TYR 111 CE1  VS B LEU 212 CG  
Distance: 5.028852 - Hydrophobic, 
34 - X TYR 111 CE1  VS B LEU 212 CD1 
Distance: 4.909386 - Hydrophobic, 
35 - X TYR 111 CE1  VS B LEU 212 CD2 
Distance: 5.082434 - Hydrophobic, 
36 - X SER 114 O    VS B ASN 211 ND2 
Distance: 4.514394 - Hydrogen Bonds, 
37 - X SER 114 OG   VS B ASN 211 N   
Distance: 4.319827 - Hydrogen Bonds, 
38 - X SER 114 OG   VS B ASN 211 ND2 
Distance: 3.052306 - Hydrogen Bonds,