VIRAL PROTEIN, IMMUNE SYSTEM
STRUCTURE OF SARS-COV-2 S PROTEIN IN COMPLEX WITH N-TERMINAL DOMAIN ANTIBODY DH1052:

0 - S SER 49 OG   VS A GLN 218 O   
Distance: 4.428794 - Hydrogen Bonds, 
1 - S SER 49 OG   VS A GLN 218 OE1 
Distance: 2.652880 - Hydrogen Bonds, 
2 - S SER 49 OG   VS A GLN 218 NE2 
Distance: 4.126594 - Hydrogen Bonds, 
3 - S SER 50 N    VS A GLN 218 OE1 
Distance: 3.286625 - Hydrogen Bonds, 
4 - S SER 50 OG   VS A GLN 218 OE1 
Distance: 3.779934 - Hydrogen Bonds, 
5 - S SER 50 OG   VS A GLN 218 NE2 
Distance: 3.022336 - Hydrogen Bonds, 
6 - S SER 51 N    VS A GLN 218 OE1 
Distance: 2.906872 - Hydrogen Bonds, 
7 - S SER 51 OG   VS A GLN 218 OE1 
Distance: 3.304014 - Hydrogen Bonds, 
8 - S SER 51 OG   VS A GLN 218 NE2 
Distance: 3.039901 - Hydrogen Bonds, 
9 - S TYR 52 CG   VS A PHE 32 CG  
Distance: 4.939033 - Aromatic Stacking, 
10 - S TYR 52 CG   VS A PHE 32 CE2 
Distance: 5.228029 - Hydrophobic, 
11 - S TYR 52 CD1  VS A PHE 32 CD2 
Distance: 5.291901 - Hydrophobic, 
12 - S TYR 52 CD1  VS A PHE 32 CE2 
Distance: 4.356798 - Hydrophobic, 
13 - S TYR 52 CD1  VS A PHE 32 CZ  
Distance: 4.575368 - Hydrophobic, 
14 - S TYR 52 CD2  VS A PHE 32 CE2 
Distance: 5.402191 - Hydrophobic, 
15 - S TYR 52 CE1  VS A PHE 32 CG  
Distance: 5.147798 - Hydrophobic, 
16 - S TYR 52 CE1  VS A PHE 32 CD1 
Distance: 5.056171 - Hydrophobic, 
17 - S TYR 52 CE1  VS A PHE 32 CD2 
Distance: 4.426827 - Hydrophobic, 
18 - S TYR 52 CE1  VS A PHE 32 CE1 
Distance: 4.292769 - Hydrophobic, 
19 - S TYR 52 CE1  VS A PHE 32 CE2 
Distance: 3.474908 - Hydrophobic, 
20 - S TYR 52 CE1  VS A PHE 32 CZ  
Distance: 3.434168 - Hydrophobic, 
21 - S TYR 52 CE2  VS A PHE 32 CG  
Distance: 5.487575 - Hydrophobic, 
22 - S TYR 52 CE2  VS A PHE 32 CD2 
Distance: 5.039135 - Hydrophobic, 
23 - S TYR 52 CE2  VS A PHE 32 CE1 
Distance: 5.365607 - Hydrophobic, 
24 - S TYR 52 CE2  VS A PHE 32 CE2 
Distance: 4.725772 - Hydrophobic, 
25 - S TYR 52 CE2  VS A PHE 32 CZ  
Distance: 4.951774 - Hydrophobic, 
26 - S TYR 52 OH   VS A ARG 214 NH1 
Distance: 3.422032 - Hydrogen Bonds, 
27 - S TYR 52 OH   VS A ARG 214 NH2 
Distance: 3.368869 - Hydrogen Bonds, 
28 - S TYR 52 OH   VS A LEU 216 O   
Distance: 3.905496 - Hydrogen Bonds, 
29 - S TYR 52 CE2  VS A PRO 217 CB  
Distance: 4.782506 - Hydrophobic, 
30 - S TYR 52 OH   VS A PRO 217 O   
Distance: 4.635169 - Hydrogen Bonds, 
31 - S TYR 52 N    VS A GLN 218 OE1 
Distance: 4.533308 - Hydrogen Bonds, 
32 - S TYR 52 CD2  VS A GLN 218 CB  
Distance: 4.593963 - Hydrophobic, 
33 - S TYR 52 CE1  VS A GLN 218 CB  
Distance: 5.326140 - Hydrophobic, 
34 - S TYR 52 CE2  VS A GLN 218 CB  
Distance: 3.912516 - Hydrophobic, 
35 - S TYR 52 CE2  VS A GLN 218 CG  
Distance: 5.262474 - Hydrophobic, 
36 - S TYR 52 OH   VS A GLN 218 N   
Distance: 3.141747 - Hydrogen Bonds, 
37 - S SER 87 OG   VS A ASN 606 ND2 
Distance: 3.029329 - Hydrogen Bonds, 
38 - S TYR 111 CD1  VS A LEU 212 CD1 
Distance: 5.476648 - Hydrophobic, 
39 - S TYR 111 CD1  VS A LEU 212 CD2 
Distance: 4.936436 - Hydrophobic, 
40 - S TYR 111 CD2  VS A LEU 212 CD1 
Distance: 5.368926 - Hydrophobic, 
41 - S TYR 111 CE1  VS A LEU 212 CB  
Distance: 5.499721 - Hydrophobic, 
42 - S TYR 111 CE1  VS A LEU 212 CG  
Distance: 5.111708 - Hydrophobic, 
43 - S TYR 111 CE1  VS A LEU 212 CD1 
Distance: 4.634443 - Hydrophobic, 
44 - S TYR 111 CE1  VS A LEU 212 CD2 
Distance: 4.454364 - Hydrophobic, 
45 - S TYR 111 CE2  VS A LEU 212 CD1 
Distance: 4.468804 - Hydrophobic, 
46 - S TYR 111 CE2  VS A LEU 212 CD2 
Distance: 5.267384 - Hydrophobic, 
47 - S SER 114 OG   VS A ASN 211 OD1 
Distance: 4.340315 - Hydrogen Bonds, 
48 - S SER 114 O    VS A LEU 212 N   
Distance: 4.660874 - Hydrogen Bonds, 
49 - S PRO 115 CB   VS A ASN 211 CB  
Distance: 5.387711 - Hydrophobic,