VIRAL PROTEIN, IMMUNE SYSTEM
STRUCTURE OF SARS-COV-2 S PROTEIN IN COMPLEX WITH RECEPTOR BINDING DOMAIN ANTIBODY DH1041:

0 - A GLY 447 O    VS H LYS 58 NZ  
Distance: 4.501377 - Hydrogen Bonds, 
1 - A TYR 449 O    VS H ARG 97 NE  
Distance: 4.796395 - Hydrogen Bonds, 
2 - A TYR 449 O    VS H ARG 97 NH1 
Distance: 3.347660 - Hydrogen Bonds, 
3 - A TYR 449 O    VS H ARG 97 NH2 
Distance: 2.790277 - Hydrogen Bonds, 
4 - A ASN 450 O    VS H ARG 97 NH2 
Distance: 4.830262 - Hydrogen Bonds, 
5 - A LEU 452 CG   VS H ASP 99 CB  
Distance: 4.469300 - Hydrophobic, 
6 - A LEU 452 CD1  VS H ASP 99 CB  
Distance: 4.043006 - Hydrophobic, 
7 - A LEU 452 CD2  VS H ASP 99 CB  
Distance: 3.730784 - Hydrophobic, 
8 - A GLU 484 OE1  VS H ARG 94 NE  
Distance: 4.918828 - Attractive, 
9 - A GLU 484 OE1  VS H ARG 94 CZ  
Distance: 3.666190 - Attractive, 
10 - A GLU 484 OE1  VS H ARG 94 NH1 
Distance: 2.813794 - Attractive, Hydrogen Bonds, 
11 - A GLU 484 OE1  VS H ARG 94 NH2 
Distance: 3.596036 - Attractive, Hydrogen Bonds, 
12 - A GLU 484 OE2  VS H ARG 94 NE  
Distance: 4.557275 - Attractive, Hydrogen Bonds, 
13 - A GLU 484 OE2  VS H ARG 94 CZ  
Distance: 3.376525 - Attractive, 
14 - A GLU 484 OE2  VS H ARG 94 NH1 
Distance: 3.286333 - Attractive, Hydrogen Bonds, 
15 - A GLU 484 OE2  VS H ARG 94 NH2 
Distance: 2.715138 - Attractive, Hydrogen Bonds, 
16 - A GLU 484 O    VS H ARG 96 NH2 
Distance: 4.343177 - Hydrogen Bonds, 
17 - A GLU 484 CG   VS H ARG 96 CG  
Distance: 4.363644 - Hydrophobic, 
18 - A GLU 484 OE1  VS H ARG 96 NE  
Distance: 4.051885 - Attractive, Hydrogen Bonds, 
19 - A GLU 484 OE1  VS H ARG 96 CZ  
Distance: 4.795743 - Attractive, 
20 - A GLU 484 OE1  VS H ARG 96 NH1 
Distance: 5.946590 - Attractive, 
21 - A GLU 484 OE1  VS H ARG 96 NH2 
Distance: 4.699576 - Attractive, Hydrogen Bonds, 
22 - A GLU 484 OE2  VS H ARG 96 NE  
Distance: 2.775845 - Attractive, Hydrogen Bonds, 
23 - A GLU 484 OE2  VS H ARG 96 CZ  
Distance: 3.152210 - Attractive, 
24 - A GLU 484 OE2  VS H ARG 96 NH1 
Distance: 4.410683 - Attractive, Hydrogen Bonds, 
25 - A GLU 484 OE2  VS H ARG 96 NH2 
Distance: 2.733374 - Attractive, Hydrogen Bonds, 
26 - A GLU 484 OE1  VS H ASP 101 OD1 
Distance: 6.073508 - Repulsive, 
27 - A GLU 484 OE1  VS H ASP 101 OD2 
Distance: 6.132216 - Repulsive, 
28 - A GLU 484 OE2  VS H ASP 101 OD1 
Distance: 4.504853 - Repulsive, 
29 - A GLU 484 OE2  VS H ASP 101 OD2 
Distance: 4.731556 - Repulsive, 
30 - A GLY 485 N    VS H SER 31 OG  
Distance: 4.656427 - Hydrogen Bonds, 
31 - A GLY 485 O    VS H SER 31 OG  
Distance: 4.590398 - Hydrogen Bonds, 
32 - A PHE 486 N    VS H SER 31 O   
Distance: 4.880883 - Hydrogen Bonds, 
33 - A PHE 486 N    VS H SER 31 OG  
Distance: 2.862802 - Hydrogen Bonds, 
34 - A PHE 490 CE2  VS H ASN 100 CB  
Distance: 5.077275 - Hydrophobic, 
35 - A PHE 490 CZ   VS H ASN 100 CB  
Distance: 4.889281 - Hydrophobic, 
36 - A LEU 492 O    VS H ARG 52 NH1 
Distance: 3.930370 - Hydrogen Bonds, 
37 - A LEU 492 O    VS H ARG 52 NH2 
Distance: 3.156937 - Hydrogen Bonds, 
38 - A GLN 493 NE2  VS H GLN 53 OE1 
Distance: 4.125347 - Hydrogen Bonds, 
39 - A GLN 493 CG   VS H ASP 54 CB  
Distance: 4.859071 - Hydrophobic, 
40 - A GLN 493 NE2  VS H ASP 54 OD1 
Distance: 4.703090 - Hydrogen Bonds, 
41 - A GLN 493 NE2  VS H ASP 54 OD2 
Distance: 2.810418 - Hydrogen Bonds, 
42 - A SER 494 N    VS H ASP 54 OD1 
Distance: 4.698986 - Hydrogen Bonds, 
43 - A SER 494 N    VS H ASP 54 OD2 
Distance: 4.664498 - Hydrogen Bonds, 
44 - A SER 494 OG   VS H ASP 54 OD1 
Distance: 3.656412 - Hydrogen Bonds, 
45 - A SER 494 OG   VS H SER 56 OG  
Distance: 2.870433 - Hydrogen Bonds, 
46 - A SER 494 OG   VS H ARG 97 NH2 
Distance: 4.432565 - Hydrogen Bonds,