VIRAL PROTEIN/IMMUNE SYSTEM
STRUCTURE OF THE SARS-COV-2 S 2P TRIMER IN COMPLEX WITH THE HUMAN NEUTRALIZING ANTIBODY FAB FRAGMENT, C121 (STATE 1):

0 - C GLY 404 O    VS F SER 65 OG  
Distance: 2.614195 - Hydrogen Bonds, 
1 - C GLY 404 O    VS F LYS 66 N   
Distance: 4.687706 - Hydrogen Bonds, 
2 - C GLY 404 O    VS F SER 67 OG  
Distance: 4.024575 - Hydrogen Bonds, 
3 - C ASP 405 N    VS F SER 65 OG  
Distance: 3.715551 - Hydrogen Bonds, 
4 - C ASP 405 O    VS F SER 65 OG  
Distance: 3.531117 - Hydrogen Bonds, 
5 - C ASP 405 OD1  VS F SER 65 OG  
Distance: 4.481562 - Hydrogen Bonds, 
6 - C ASP 405 OD1  VS F SER 72 OG  
Distance: 4.248068 - Hydrogen Bonds, 
7 - C GLU 406 N    VS F SER 65 OG  
Distance: 3.681920 - Hydrogen Bonds, 
8 - C VAL 407 N    VS F SER 65 OG  
Distance: 3.999827 - Hydrogen Bonds, 
9 - C ARG 408 NH1  VS F VAL 33 O   
Distance: 4.566379 - Hydrogen Bonds, 
10 - C ARG 408 NE   VS F GLY 51 O   
Distance: 4.031937 - Hydrogen Bonds, 
11 - C ARG 408 NH1  VS F GLY 51 O   
Distance: 2.091723 - Hydrogen Bonds, 
12 - C ARG 408 NH2  VS F GLY 51 O   
Distance: 4.216889 - Hydrogen Bonds, 
13 - C ARG 408 NE   VS F SER 52 OG  
Distance: 4.286290 - Hydrogen Bonds, 
14 - C ARG 408 NH1  VS F SER 52 OG  
Distance: 3.331601 - Hydrogen Bonds, 
15 - C ARG 408 NE   VS F GLY 64 O   
Distance: 4.630076 - Hydrogen Bonds, 
16 - C ARG 408 NH1  VS F GLY 64 O   
Distance: 4.114476 - Hydrogen Bonds, 
17 - C ARG 408 N    VS F SER 65 OG  
Distance: 4.884011 - Hydrogen Bonds, 
18 - C ARG 408 NE   VS F SER 65 O   
Distance: 3.358109 - Hydrogen Bonds, 
19 - C ARG 408 NH1  VS F SER 65 O   
Distance: 3.872801 - Hydrogen Bonds, 
20 - C ARG 408 NH2  VS F SER 65 O   
Distance: 2.269838 - Hydrogen Bonds, 
21 - C ARG 408 CB   VS F LYS 66 CB  
Distance: 5.171024 - Hydrophobic, 
22 - C ARG 408 CG   VS F LYS 66 CB  
Distance: 3.807826 - Hydrophobic, 
23 - C ARG 408 CG   VS F LYS 66 CG  
Distance: 4.846519 - Hydrophobic, 
24 - C ARG 408 CG   VS F LYS 66 CD  
Distance: 4.980276 - Hydrophobic, 
25 - C ARG 408 NE   VS F LYS 66 NZ  
Distance: 6.674257 - Repulsive, 
26 - C ARG 408 NH1  VS F SER 72 O   
Distance: 4.665769 - Hydrogen Bonds, 
27 - C ARG 408 NH2  VS F SER 72 O   
Distance: 4.261330 - Hydrogen Bonds, 
28 - C GLN 409 NE2  VS F SER 63 OG  
Distance: 4.057895 - Hydrogen Bonds, 
29 - C GLN 409 NE2  VS F GLY 64 O   
Distance: 4.692884 - Hydrogen Bonds, 
30 - C GLN 414 OE1  VS F SER 52 OG  
Distance: 4.821859 - Hydrogen Bonds, 
31 - C GLN 414 OE1  VS F LYS 53 N   
Distance: 4.623999 - Hydrogen Bonds, 
32 - C THR 415 OG1  VS F ARG 54 NH1 
Distance: 4.679097 - Hydrogen Bonds, 
33 - C THR 415 CG2  VS F ASN 60 CB  
Distance: 4.692378 - Hydrophobic, 
34 - C ASP 420 OD2  VS F ARG 54 NH1 
Distance: 6.884649 - Attractive, 
35 - C VAL 503 O    VS F SER 67 OG  
Distance: 4.336017 - Hydrogen Bonds, 
36 - C VAL 503 CG1  VS F THR 70 CG2 
Distance: 5.325486 - Hydrophobic, 
37 - C GLY 504 N    VS F SER 67 OG  
Distance: 4.039468 - Hydrogen Bonds, 
38 - C GLY 504 O    VS F SER 67 OG  
Distance: 4.473146 - Hydrogen Bonds, 
39 - C TYR 505 CE1  VS F THR 20 CG2 
Distance: 5.081312 - Hydrophobic, 
40 - C TYR 508 OH   VS F GLY 68 N   
Distance: 4.470181 - Hydrogen Bonds,