VIRAL PROTEIN/IMMUNE SYSTEM
SARS-COV-2 SPIKE IN COMPLEX WITH THE S2H13 NEUTRALIZING ANTIBODY FAB FRAGMENT (LOCAL REFINEMENT OF THE RECEPTOR-BINDING MOTIF AND FAB VARIABLE DOMAINS):

0 - L GLY 15 O    VS A GLY 446 N   
Distance: 4.448067 - Hydrogen Bonds, 
1 - L TYR 51 OH   VS A GLY 485 N   
Distance: 4.255717 - Hydrogen Bonds, 
2 - L TYR 51 OH   VS A GLY 485 O   
Distance: 3.241913 - Hydrogen Bonds, 
3 - L TYR 51 CE2  VS A PHE 486 CB  
Distance: 5.293690 - Hydrophobic, 
4 - L TYR 51 OH   VS A PHE 486 N   
Distance: 4.554157 - Hydrogen Bonds, 
5 - L TYR 51 OH   VS A CYS 488 O   
Distance: 4.513814 - Hydrogen Bonds, 
6 - L ASN 55 CB   VS A TYR 489 CE1 
Distance: 5.430315 - Hydrophobic, 
7 - L HIS 57 N    VS A GLU 484 OE2 
Distance: 4.492190 - Hydrogen Bonds, 
8 - L HIS 57 CB   VS A GLU 484 CG  
Distance: 5.062072 - Hydrophobic, 
9 - L HIS 57 ND1  VS A GLU 484 OE1 
Distance: 4.660442 - Attractive, Hydrogen Bonds, 
10 - L HIS 57 ND1  VS A GLU 484 OE2 
Distance: 3.206786 - Attractive, Hydrogen Bonds, 
11 - L HIS 57 NE2  VS A GLU 484 OE1 
Distance: 6.686338 - Attractive, 
12 - L HIS 57 NE2  VS A GLU 484 OE2 
Distance: 5.332189 - Attractive, 
13 - L SER 58 N    VS A GLU 484 OE1 
Distance: 3.697460 - Hydrogen Bonds, 
14 - L SER 58 N    VS A GLU 484 OE2 
Distance: 2.761131 - Hydrogen Bonds, 
15 - L SER 58 OG   VS A GLU 484 OE1 
Distance: 2.808949 - Hydrogen Bonds, 
16 - L SER 58 OG   VS A GLU 484 OE2 
Distance: 3.801916 - Hydrogen Bonds, 
17 - L TRP 59 CE3  VS A GLU 484 CG  
Distance: 5.023614 - Hydrophobic, 
18 - L TRP 59 CZ2  VS A GLU 484 CG  
Distance: 5.174957 - Hydrophobic, 
19 - L TRP 59 CZ3  VS A GLU 484 CB  
Distance: 5.352628 - Hydrophobic, 
20 - L TRP 59 CZ3  VS A GLU 484 CG  
Distance: 4.053939 - Hydrophobic, 
21 - L TRP 59 CH2  VS A GLU 484 CG  
Distance: 4.146571 - Hydrophobic, 
22 - L ALA 62 O    VS A TYR 449 OH  
Distance: 4.226754 - Hydrogen Bonds, 
23 - L ALA 62 CB   VS A TYR 449 CB  
Distance: 3.928760 - Hydrophobic, 
24 - L ALA 62 CB   VS A TYR 449 CG  
Distance: 3.838504 - Hydrophobic, 
25 - L ALA 62 CB   VS A TYR 449 CD1 
Distance: 4.805600 - Hydrophobic, 
26 - L ALA 62 CB   VS A TYR 449 CD2 
Distance: 3.387638 - Hydrophobic, 
27 - L ALA 62 CB   VS A TYR 449 CE1 
Distance: 5.308154 - Hydrophobic, 
28 - L ALA 62 CB   VS A TYR 449 CE2 
Distance: 4.062170 - Hydrophobic, 
29 - L ARG 63 O    VS A TYR 449 OH  
Distance: 4.861362 - Hydrogen Bonds, 
30 - L ARG 63 CB   VS A TYR 449 CG  
Distance: 5.391272 - Hydrophobic, 
31 - L ARG 63 CB   VS A TYR 449 CD1 
Distance: 4.762936 - Hydrophobic, 
32 - L ARG 63 CB   VS A TYR 449 CE1 
Distance: 4.561406 - Hydrophobic, 
33 - L ARG 63 CG   VS A TYR 449 CB  
Distance: 5.171462 - Hydrophobic, 
34 - L ARG 63 CG   VS A TYR 449 CG  
Distance: 4.583023 - Hydrophobic, 
35 - L ARG 63 CG   VS A TYR 449 CD1 
Distance: 3.812271 - Hydrophobic, 
36 - L ARG 63 CG   VS A TYR 449 CD2 
Distance: 5.295614 - Hydrophobic, 
37 - L ARG 63 CG   VS A TYR 449 CE1 
Distance: 3.904351 - Hydrophobic, 
38 - L ARG 63 CG   VS A TYR 449 CE2 
Distance: 5.360108 - Hydrophobic, 
39 - L SER 78 O    VS A GLY 447 N   
Distance: 4.798399 - Hydrogen Bonds, 
40 - L SER 78 OG   VS A TYR 449 OH  
Distance: 2.967932 - Hydrogen Bonds, 
41 - L SER 78 OG   VS A GLN 498 NE2 
Distance: 4.478450 - Hydrogen Bonds, 
42 - L GLY 79 N    VS A GLY 446 O   
Distance: 3.836251 - Hydrogen Bonds, 
43 - L ARG 81 NE   VS A LYS 444 NZ  
Distance: 6.224962 - Repulsive, 
44 - L ARG 81 CZ   VS A LYS 444 NZ  
Distance: 6.006543 - Repulsive, 
45 - L ARG 81 NH1  VS A LYS 444 NZ  
Distance: 5.638777 - Repulsive, 
46 - L ARG 81 NH2  VS A LYS 444 NZ  
Distance: 6.558304 - Repulsive,