VIRAL PROTEIN/ANTIVIRAL PROTEIN CRYSTAL STRUCTURE OF SARS-COV-2 RBD IN COMPLEX WITH A NEUTRALIZING ANTIBODY SCFV: 0 - C VAL 2 CB VS D PHE 486 CE1 Distance: 5.356531 - Hydrophobic, 1 - C VAL 2 CG2 VS D PHE 486 CD1 Distance: 4.362690 - Hydrophobic, 2 - C VAL 2 CG2 VS D PHE 486 CE1 Distance: 3.897630 - Hydrophobic, 3 - C VAL 2 CG2 VS D PHE 486 CZ Distance: 4.925779 - Hydrophobic, 4 - C PHE 27 CB VS D PHE 486 CD1 Distance: 4.894030 - Hydrophobic, 5 - C PHE 27 CB VS D PHE 486 CE1 Distance: 3.847542 - Hydrophobic, 6 - C PHE 27 CB VS D PHE 486 CZ Distance: 4.280504 - Hydrophobic, 7 - C PHE 27 CG VS D PHE 486 CE1 Distance: 5.164669 - Hydrophobic, 8 - C THR 28 OG1 VS D ASN 487 OD1 Distance: 4.607903 - Hydrogen Bonds, 9 - C THR 28 OG1 VS D TYR 489 OH Distance: 4.552100 - Hydrogen Bonds, 10 - C TYR 31 CB VS D PHE 456 CE1 Distance: 5.214504 - Hydrophobic, 11 - C TYR 31 CB VS D PHE 456 CE2 Distance: 5.373872 - Hydrophobic, 12 - C TYR 31 CB VS D PHE 456 CZ Distance: 4.463241 - Hydrophobic, 13 - C TYR 31 CG VS D PHE 456 CG Distance: 5.091171 - Aromatic Stacking, 14 - C TYR 31 CG VS D PHE 456 CE1 Distance: 4.341129 - Hydrophobic, 15 - C TYR 31 CG VS D PHE 456 CE2 Distance: 5.159765 - Hydrophobic, 16 - C TYR 31 CG VS D PHE 456 CZ Distance: 3.970516 - Hydrophobic, 17 - C TYR 31 CD1 VS D PHE 456 CE1 Distance: 4.306405 - Hydrophobic, 18 - C TYR 31 CD1 VS D PHE 456 CE2 Distance: 5.461946 - Hydrophobic, 19 - C TYR 31 CD1 VS D PHE 456 CZ Distance: 4.200614 - Hydrophobic, 20 - C TYR 31 CD2 VS D PHE 456 CD1 Distance: 5.462824 - Hydrophobic, 21 - C TYR 31 CD2 VS D PHE 456 CE1 Distance: 4.159036 - Hydrophobic, 22 - C TYR 31 CD2 VS D PHE 456 CE2 Distance: 5.225787 - Hydrophobic, 23 - C TYR 31 CD2 VS D PHE 456 CZ Distance: 3.998508 - Hydrophobic, 24 - C TYR 31 CE1 VS D PHE 456 CD1 Distance: 5.277480 - Hydrophobic, 25 - C TYR 31 CE1 VS D PHE 456 CE1 Distance: 4.110602 - Hydrophobic, 26 - C TYR 31 CE1 VS D PHE 456 CZ Distance: 4.454322 - Hydrophobic, 27 - C TYR 31 CE2 VS D PHE 456 CD1 Distance: 5.121241 - Hydrophobic, 28 - C TYR 31 CE2 VS D PHE 456 CE1 Distance: 3.966278 - Hydrophobic, 29 - C TYR 31 CE2 VS D PHE 456 CZ Distance: 4.269110 - Hydrophobic, 30 - C TYR 31 CE2 VS D ALA 475 CB Distance: 5.312817 - Hydrophobic, 31 - C TYR 31 CB VS D TYR 489 CD2 Distance: 5.314604 - Hydrophobic, 32 - C TYR 31 CB VS D TYR 489 CE1 Distance: 5.211623 - Hydrophobic, 33 - C TYR 31 CB VS D TYR 489 CE2 Distance: 4.734558 - Hydrophobic, 34 - C TYR 31 CG VS D TYR 489 CG Distance: 5.692542 - Aromatic Stacking, 35 - C TYR 31 CG VS D TYR 489 CD2 Distance: 5.167553 - Hydrophobic, 36 - C TYR 31 CG VS D TYR 489 CE2 Distance: 4.487333 - Hydrophobic, 37 - C TYR 31 CD2 VS D TYR 489 CG Distance: 5.460726 - Hydrophobic, 38 - C TYR 31 CD2 VS D TYR 489 CD2 Distance: 4.458883 - Hydrophobic, 39 - C TYR 31 CD2 VS D TYR 489 CE1 Distance: 5.002860 - Hydrophobic, 40 - C TYR 31 CD2 VS D TYR 489 CE2 Distance: 3.552169 - Hydrophobic, 41 - C TYR 31 CE2 VS D TYR 489 CD2 Distance: 4.924519 - Hydrophobic, 42 - C TYR 31 CE2 VS D TYR 489 CE2 Distance: 4.035883 - Hydrophobic, 43 - C TYR 32 OH VS D GLY 485 O Distance: 4.886348 - Hydrogen Bonds, 44 - C TYR 32 OH VS D ASN 487 N Distance: 4.825369 - Hydrogen Bonds, 45 - C TYR 32 CG VS D TYR 489 CG Distance: 6.118099 - Aromatic Stacking, 46 - C TYR 32 CD1 VS D TYR 489 CE1 Distance: 5.248475 - Hydrophobic, 47 - C TYR 32 CE1 VS D TYR 489 CD1 Distance: 5.350346 - Hydrophobic, 48 - C TYR 32 CE1 VS D TYR 489 CE1 Distance: 4.272063 - Hydrophobic, 49 - C TYR 32 CE2 VS D TYR 489 CE1 Distance: 5.140730 - Hydrophobic, 50 - C TYR 32 OH VS D TYR 489 OH Distance: 4.175122 - Hydrogen Bonds, 51 - C TRP 52 CZ2 VS D TYR 449 CD1 Distance: 4.642840 - Hydrophobic, 52 - C TRP 52 CZ2 VS D TYR 449 CE1 Distance: 4.087665 - Hydrophobic, 53 - C TRP 52 CZ3 VS D TYR 449 CE1 Distance: 4.943804 - Hydrophobic, 54 - C TRP 52 CH2 VS D TYR 449 CD1 Distance: 4.655509 - Hydrophobic, 55 - C TRP 52 CH2 VS D TYR 449 CE1 Distance: 3.755558 - Hydrophobic, 56 - C TRP 52 NE1 VS D SER 494 O Distance: 3.492094 - Hydrogen Bonds, 57 - C TRP 52 NE1 VS D TYR 495 O Distance: 3.363265 - Hydrogen Bonds, 58 - C TYR 53 CE2 VS D LYS 417 CD Distance: 5.243404 - Hydrophobic, 59 - C TYR 53 CG VS D TYR 453 CE1 Distance: 6.914228 - Aromatic Stacking, 60 - C TYR 53 CE1 VS D TYR 453 CE1 Distance: 5.486701 - Hydrophobic, 61 - C TYR 53 CE1 VS D TYR 453 CE2 Distance: 5.013007 - Hydrophobic, 62 - C TYR 53 OH VS D TYR 453 OH Distance: 2.814602 - Hydrogen Bonds, 63 - C TYR 53 CG VS D LEU 455 CD2 Distance: 5.446689 - Hydrophobic, 64 - C TYR 53 CD1 VS D LEU 455 CD1 Distance: 5.384799 - Hydrophobic, 65 - C TYR 53 CD1 VS D LEU 455 CD2 Distance: 5.310169 - Hydrophobic, 66 - C TYR 53 CD2 VS D LEU 455 CD1 Distance: 5.087122 - Hydrophobic, 67 - C TYR 53 CD2 VS D LEU 455 CD2 Distance: 5.244329 - Hydrophobic, 68 - C TYR 53 CE1 VS D LEU 455 CG Distance: 5.423271 - Hydrophobic, 69 - C TYR 53 CE1 VS D LEU 455 CD1 Distance: 4.509867 - Hydrophobic, 70 - C TYR 53 CE1 VS D LEU 455 CD2 Distance: 4.987391 - Hydrophobic, 71 - C TYR 53 CE2 VS D LEU 455 CG Distance: 4.996181 - Hydrophobic, 72 - C TYR 53 CE2 VS D LEU 455 CD1 Distance: 4.138204 - Hydrophobic, 73 - C TYR 53 CE2 VS D LEU 455 CD2 Distance: 4.908652 - Hydrophobic, 74 - C TYR 53 CD1 VS D GLN 493 CG Distance: 4.983856 - Hydrophobic, 75 - C TYR 53 CE1 VS D GLN 493 CG Distance: 4.506744 - Hydrophobic, 76 - C ASP 54 OD1 VS D ARG 403 NE Distance: 6.316752 - Attractive, 77 - C ASP 54 OD1 VS D ARG 403 CZ Distance: 5.002323 - Attractive, 78 - C ASP 54 OD1 VS D ARG 403 NH1 Distance: 4.375849 - Attractive, Hydrogen Bonds, 79 - C ASP 54 OD1 VS D ARG 403 NH2 Distance: 4.627379 - Attractive, Hydrogen Bonds, 80 - C ASP 54 OD2 VS D ARG 403 NE Distance: 5.168215 - Attractive, 81 - C ASP 54 OD2 VS D ARG 403 CZ Distance: 3.956380 - Attractive, 82 - C ASP 54 OD2 VS D ARG 403 NH1 Distance: 3.762588 - Attractive, Hydrogen Bonds, 83 - C ASP 54 OD2 VS D ARG 403 NH2 Distance: 3.384422 - Attractive, Hydrogen Bonds, 84 - C ASP 54 OD2 VS D ASP 405 OD2 Distance: 6.796163 - Repulsive, 85 - C ASP 54 OD2 VS D GLU 406 OE2 Distance: 6.661613 - Repulsive, 86 - C SER 56 OG VS D ARG 403 NH1 Distance: 3.136415 - Hydrogen Bonds, 87 - C SER 56 OG VS D ARG 403 NH2 Distance: 4.436428 - Hydrogen Bonds, 88 - C SER 56 N VS D TYR 505 OH Distance: 4.796987 - Hydrogen Bonds, 89 - C ASN 57 ND2 VS D TYR 495 O Distance: 3.262417 - Hydrogen Bonds, 90 - C ASN 57 ND2 VS D GLY 496 O Distance: 2.874312 - Hydrogen Bonds, 91 - C ASN 57 OD1 VS D ASN 501 ND2 Distance: 3.860278 - Hydrogen Bonds, 92 - C ARG 58 N VS D GLN 498 OE1 Distance: 4.890602 - Hydrogen Bonds, 93 - C ARG 58 O VS D GLN 498 NE2 Distance: 4.341767 - Hydrogen Bonds, 94 - C PHE 59 CG VS D TYR 449 CD1 Distance: 6.583853 - Aromatic Stacking, 95 - C PHE 59 CE1 VS D TYR 449 CE1 Distance: 5.138524 - Hydrophobic, 96 - C PHE 59 CZ VS D TYR 449 CE1 Distance: 5.324871 - Hydrophobic, 97 - C PHE 59 CD2 VS D GLN 498 CB Distance: 5.377044 - Hydrophobic, 98 - C PHE 59 CD2 VS D GLN 498 CG Distance: 4.789584 - Hydrophobic, 99 - C PHE 59 CE1 VS D GLN 498 CB Distance: 5.119250 - Hydrophobic, 100 - C PHE 59 CE1 VS D GLN 498 CG Distance: 5.321176 - Hydrophobic, 101 - C PHE 59 CE2 VS D GLN 498 CB Distance: 4.263539 - Hydrophobic, 102 - C PHE 59 CE2 VS D GLN 498 CG Distance: 3.861720 - Hydrophobic, 103 - C PHE 59 CZ VS D GLN 498 CB Distance: 4.091813 - Hydrophobic, 104 - C PHE 59 CZ VS D GLN 498 CG Distance: 4.186686 - Hydrophobic, 105 - C PRO 100 CB VS D TYR 489 CD1 Distance: 5.128353 - Hydrophobic, 106 - C PRO 100 CB VS D TYR 489 CE1 Distance: 5.354013 - Hydrophobic, 107 - C PRO 101 CB VS D LEU 455 CB Distance: 5.490613 - Hydrophobic, 108 - C PRO 101 CB VS D LEU 455 CG Distance: 5.200197 - Hydrophobic, 109 - C PRO 101 CB VS D LEU 455 CD2 Distance: 3.853609 - Hydrophobic, 110 - C PRO 101 CG VS D LEU 455 CD2 Distance: 4.346062 - Hydrophobic, 111 - C PRO 101 CB VS D PHE 456 CD2 Distance: 5.147793 - Hydrophobic, 112 - C PRO 101 CB VS D PHE 456 CE2 Distance: 4.176899 - Hydrophobic, 113 - C PRO 101 CB VS D PHE 456 CZ Distance: 4.870089 - Hydrophobic, 114 - C PRO 101 CG VS D PHE 456 CD2 Distance: 5.295075 - Hydrophobic, 115 - C PRO 101 CG VS D PHE 456 CE2 Distance: 4.092938 - Hydrophobic, 116 - C PRO 101 CG VS D PHE 456 CZ Distance: 4.399726 - Hydrophobic, 117 - C PRO 101 CB VS D TYR 489 CB Distance: 4.316441 - Hydrophobic, 118 - C PRO 101 CB VS D TYR 489 CG Distance: 4.601113 - Hydrophobic, 119 - C PRO 101 CB VS D TYR 489 CD1 Distance: 4.774442 - Hydrophobic, 120 - C PRO 101 CB VS D TYR 489 CD2 Distance: 5.279036 - Hydrophobic, 121 - C PRO 101 CG VS D TYR 489 CB Distance: 4.142942 - Hydrophobic, 122 - C PRO 101 CG VS D TYR 489 CG Distance: 3.925706 - Hydrophobic, 123 - C PRO 101 CG VS D TYR 489 CD1 Distance: 3.898777 - Hydrophobic, 124 - C PRO 101 CG VS D TYR 489 CD2 Distance: 4.458744 - Hydrophobic, 125 - C PRO 101 CG VS D TYR 489 CE1 Distance: 4.415193 - Hydrophobic, 126 - C PRO 101 CG VS D TYR 489 CE2 Distance: 4.918143 - Hydrophobic, 127 - C PRO 101 O VS D PHE 490 N Distance: 4.135112 - Hydrogen Bonds, 128 - C GLY 102 N VS D PHE 490 O Distance: 4.666437 - Hydrogen Bonds, 129 - C GLY 102 N VS D LEU 492 O Distance: 4.117833 - Hydrogen Bonds, 130 - C GLY 102 N VS D GLN 493 OE1 Distance: 3.342567 - Hydrogen Bonds, 131 - C LEU 103 CD1 VS D GLU 484 CG Distance: 4.748859 - Hydrophobic, 132 - C LEU 103 CB VS D PHE 490 CB Distance: 5.085517 - Hydrophobic, 133 - C LEU 103 CB VS D PHE 490 CG Distance: 4.967776 - Hydrophobic, 134 - C LEU 103 CB VS D PHE 490 CD2 Distance: 4.851393 - Hydrophobic, 135 - C LEU 103 CB VS D PHE 490 CE2 Distance: 5.342578 - Hydrophobic, 136 - C LEU 103 CG VS D PHE 490 CB Distance: 3.966521 - Hydrophobic, 137 - C LEU 103 CG VS D PHE 490 CG Distance: 3.622979 - Hydrophobic, 138 - C LEU 103 CG VS D PHE 490 CD1 Distance: 4.057283 - Hydrophobic, 139 - C LEU 103 CG VS D PHE 490 CD2 Distance: 3.661405 - Hydrophobic, 140 - C LEU 103 CG VS D PHE 490 CE1 Distance: 4.483074 - Hydrophobic, 141 - C LEU 103 CG VS D PHE 490 CE2 Distance: 4.128809 - Hydrophobic, 142 - C LEU 103 CG VS D PHE 490 CZ Distance: 4.514772 - Hydrophobic, 143 - C LEU 103 CD1 VS D PHE 490 CB Distance: 4.023321 - Hydrophobic, 144 - C LEU 103 CD1 VS D PHE 490 CG Distance: 3.883064 - Hydrophobic, 145 - C LEU 103 CD1 VS D PHE 490 CD1 Distance: 3.966531 - Hydrophobic, 146 - C LEU 103 CD1 VS D PHE 490 CD2 Distance: 4.409128 - Hydrophobic, 147 - C LEU 103 CD1 VS D PHE 490 CE1 Distance: 4.553285 - Hydrophobic, 148 - C LEU 103 CD1 VS D PHE 490 CE2 Distance: 4.948284 - Hydrophobic, 149 - C LEU 103 CD1 VS D PHE 490 CZ Distance: 5.010414 - Hydrophobic, 150 - C LEU 103 CD2 VS D PHE 490 CB Distance: 4.694363 - Hydrophobic, 151 - C LEU 103 CD2 VS D PHE 490 CG Distance: 3.850732 - Hydrophobic, 152 - C LEU 103 CD2 VS D PHE 490 CD1 Distance: 4.010499 - Hydrophobic, 153 - C LEU 103 CD2 VS D PHE 490 CD2 Distance: 3.580597 - Hydrophobic, 154 - C LEU 103 CD2 VS D PHE 490 CE1 Distance: 3.927449 - Hydrophobic, 155 - C LEU 103 CD2 VS D PHE 490 CE2 Distance: 3.487368 - Hydrophobic, 156 - C LEU 103 CD2 VS D PHE 490 CZ Distance: 3.668210 - Hydrophobic, 157 - C LEU 103 N VS D LEU 492 O Distance: 4.205134 - Hydrogen Bonds, 158 - C ARG 104 CG VS D TYR 449 CB Distance: 4.793098 - Hydrophobic, 159 - C ARG 104 CG VS D TYR 449 CG Distance: 4.874936 - Hydrophobic, 160 - C ARG 104 CG VS D TYR 449 CD1 Distance: 5.078531 - Hydrophobic, 161 - C ARG 104 CG VS D TYR 449 CD2 Distance: 5.400970 - Hydrophobic, 162 - C ARG 104 NE VS D TYR 449 O Distance: 4.635957 - Hydrogen Bonds, 163 - C ARG 104 NH2 VS D TYR 449 O Distance: 4.061285 - Hydrogen Bonds, 164 - C ARG 104 NH2 VS D ASN 450 OD1 Distance: 3.933763 - Hydrogen Bonds, 165 - C PHE 105 CG VS D TYR 449 CG Distance: 5.543757 - Aromatic Stacking, 166 - C PHE 105 CD2 VS D TYR 449 CE1 Distance: 5.262684 - Hydrophobic, 167 - C PHE 105 CD2 VS D TYR 449 CE2 Distance: 5.439804 - Hydrophobic, 168 - C PHE 105 CE1 VS D TYR 449 CE1 Distance: 5.017565 - Hydrophobic, 169 - C PHE 105 CE2 VS D TYR 449 CG Distance: 5.387990 - Hydrophobic, 170 - C PHE 105 CE2 VS D TYR 449 CD1 Distance: 4.894745 - Hydrophobic, 171 - C PHE 105 CE2 VS D TYR 449 CD2 Distance: 5.140264 - Hydrophobic, 172 - C PHE 105 CE2 VS D TYR 449 CE1 Distance: 4.064839 - Hydrophobic, 173 - C PHE 105 CE2 VS D TYR 449 CE2 Distance: 4.348778 - Hydrophobic, 174 - C PHE 105 CZ VS D TYR 449 CD1 Distance: 4.919041 - Hydrophobic, 175 - C PHE 105 CZ VS D TYR 449 CE1 Distance: 3.897905 - Hydrophobic, 176 - C PHE 105 CZ VS D TYR 449 CE2 Distance: 4.792455 - Hydrophobic, 177 - C ARG 106 NE VS D GLU 484 OE1 Distance: 4.840719 - Attractive, Hydrogen Bonds, 178 - C ARG 106 NE VS D GLU 484 OE2 Distance: 4.662790 - Attractive, Hydrogen Bonds, 179 - C ARG 106 CZ VS D GLU 484 OE1 Distance: 3.600729 - Attractive, 180 - C ARG 106 CZ VS D GLU 484 OE2 Distance: 3.365839 - Attractive, 181 - C ARG 106 NH1 VS D GLU 484 OE1 Distance: 3.595995 - Attractive, Hydrogen Bonds, 182 - C ARG 106 NH1 VS D GLU 484 OE2 Distance: 2.859656 - Attractive, Hydrogen Bonds, 183 - C ARG 106 NH2 VS D GLU 484 OE1 Distance: 2.787818 - Attractive, Hydrogen Bonds, 184 - C ARG 106 NH2 VS D GLU 484 OE2 Distance: 3.038954 - Attractive, Hydrogen Bonds, 185 - C ASP 108 OD2 VS D GLU 484 OE2 Distance: 6.617958 - Repulsive, 186 - C TYR 109 CE2 VS D PHE 486 CD1 Distance: 5.052411 - Hydrophobic, 187 - C TYR 109 OH VS D PHE 486 N Distance: 4.639182 - Hydrogen Bonds, 188 - C HIS 166 NE2 VS D ASN 450 OD1 Distance: 3.839619 - Hydrogen Bonds, 189 - C TYR 170 CG VS D PHE 490 CD1 Distance: 6.328232 - Aromatic Stacking, 190 - C TYR 170 CE2 VS D PHE 490 CE1 Distance: 4.854357 - Hydrophobic, 191 - C TYR 170 CE2 VS D PHE 490 CZ Distance: 4.764344 - Hydrophobic, 192 - C TYR 189 CE2 VS D GLU 484 CB Distance: 4.774987 - Hydrophobic, 193 - C TYR 189 CE2 VS D GLU 484 CG Distance: 4.999099 - Hydrophobic, 194 - C TYR 189 OH VS D GLU 484 N Distance: 4.458629 - Hydrogen Bonds, 195 - C TYR 189 OH VS D GLU 484 O Distance: 4.077822 - Hydrogen Bonds, 196 - C TYR 189 OH VS D GLU 484 OE1 Distance: 4.644010 - Hydrogen Bonds, 197 - C GLN 233 CB VS D TYR 449 CD2 Distance: 5.139249 - Hydrophobic, 198 - C GLN 233 CB VS D TYR 449 CE2 Distance: 4.676767 - Hydrophobic, 199 - C THR 234 N VS D GLY 446 O Distance: 4.291560 - Hydrogen Bonds, 200 - C THR 234 OG1 VS D GLY 446 N Distance: 4.673984 - Hydrogen Bonds, 201 - C THR 234 OG1 VS D GLY 446 O Distance: 2.861573 - Hydrogen Bonds, 202 - C THR 234 OG1 VS D GLY 447 N Distance: 4.743725 - Hydrogen Bonds, 203 - C THR 234 N VS D TYR 449 OH Distance: 4.217049 - Hydrogen Bonds, 204 - C THR 234 OG1 VS D TYR 449 OH Distance: 3.991742 - Hydrogen Bonds, 205 - C THR 234 CG2 VS D TYR 449 CE2 Distance: 5.166928 - Hydrophobic,