VIRAL PROTEIN/ANTIVIRAL PROTEIN CRYSTAL STRUCTURE OF SARS-COV-2 RBD IN COMPLEX WITH A NEUTRALIZING ANTIBODY SCFV: 0 - A VAL 2 CB VS B PHE 486 CE1 Distance: 5.295586 - Hydrophobic, 1 - A VAL 2 CG2 VS B PHE 486 CD1 Distance: 4.260545 - Hydrophobic, 2 - A VAL 2 CG2 VS B PHE 486 CE1 Distance: 3.841400 - Hydrophobic, 3 - A VAL 2 CG2 VS B PHE 486 CZ Distance: 4.965075 - Hydrophobic, 4 - A PHE 27 CB VS B PHE 486 CD1 Distance: 4.902183 - Hydrophobic, 5 - A PHE 27 CB VS B PHE 486 CE1 Distance: 3.876305 - Hydrophobic, 6 - A PHE 27 CB VS B PHE 486 CE2 Distance: 5.443530 - Hydrophobic, 7 - A PHE 27 CB VS B PHE 486 CZ Distance: 4.236245 - Hydrophobic, 8 - A PHE 27 CG VS B PHE 486 CE1 Distance: 5.108354 - Hydrophobic, 9 - A THR 28 OG1 VS B ASN 487 OD1 Distance: 4.573258 - Hydrogen Bonds, 10 - A THR 28 OG1 VS B TYR 489 OH Distance: 4.468791 - Hydrogen Bonds, 11 - A TYR 31 CB VS B PHE 456 CE1 Distance: 4.959137 - Hydrophobic, 12 - A TYR 31 CB VS B PHE 456 CZ Distance: 4.537475 - Hydrophobic, 13 - A TYR 31 CG VS B PHE 456 CG Distance: 5.066155 - Aromatic Stacking, 14 - A TYR 31 CG VS B PHE 456 CD1 Distance: 5.431208 - Hydrophobic, 15 - A TYR 31 CG VS B PHE 456 CE1 Distance: 4.110776 - Hydrophobic, 16 - A TYR 31 CG VS B PHE 456 CE2 Distance: 5.429383 - Hydrophobic, 17 - A TYR 31 CG VS B PHE 456 CZ Distance: 4.108284 - Hydrophobic, 18 - A TYR 31 CD1 VS B PHE 456 CE1 Distance: 4.292288 - Hydrophobic, 19 - A TYR 31 CD1 VS B PHE 456 CZ Distance: 4.514661 - Hydrophobic, 20 - A TYR 31 CD2 VS B PHE 456 CD1 Distance: 4.984005 - Hydrophobic, 21 - A TYR 31 CD2 VS B PHE 456 CE1 Distance: 3.776333 - Hydrophobic, 22 - A TYR 31 CD2 VS B PHE 456 CE2 Distance: 5.332636 - Hydrophobic, 23 - A TYR 31 CD2 VS B PHE 456 CZ Distance: 4.005190 - Hydrophobic, 24 - A TYR 31 CE1 VS B PHE 456 CD1 Distance: 5.163007 - Hydrophobic, 25 - A TYR 31 CE1 VS B PHE 456 CE1 Distance: 4.181517 - Hydrophobic, 26 - A TYR 31 CE1 VS B PHE 456 CZ Distance: 4.803218 - Hydrophobic, 27 - A TYR 31 CE2 VS B PHE 456 CD1 Distance: 4.606422 - Hydrophobic, 28 - A TYR 31 CE2 VS B PHE 456 CE1 Distance: 3.649659 - Hydrophobic, 29 - A TYR 31 CE2 VS B PHE 456 CZ Distance: 4.329022 - Hydrophobic, 30 - A TYR 31 CE2 VS B ALA 475 CB Distance: 5.245878 - Hydrophobic, 31 - A TYR 31 CB VS B TYR 489 CD2 Distance: 5.304703 - Hydrophobic, 32 - A TYR 31 CB VS B TYR 489 CE1 Distance: 5.317561 - Hydrophobic, 33 - A TYR 31 CB VS B TYR 489 CE2 Distance: 4.719795 - Hydrophobic, 34 - A TYR 31 CG VS B TYR 489 CG Distance: 5.804369 - Aromatic Stacking, 35 - A TYR 31 CG VS B TYR 489 CD2 Distance: 5.147495 - Hydrophobic, 36 - A TYR 31 CG VS B TYR 489 CE2 Distance: 4.524432 - Hydrophobic, 37 - A TYR 31 CD2 VS B TYR 489 CG Distance: 5.379485 - Hydrophobic, 38 - A TYR 31 CD2 VS B TYR 489 CD2 Distance: 4.315652 - Hydrophobic, 39 - A TYR 31 CD2 VS B TYR 489 CE1 Distance: 5.161275 - Hydrophobic, 40 - A TYR 31 CD2 VS B TYR 489 CE2 Distance: 3.529279 - Hydrophobic, 41 - A TYR 31 CE2 VS B TYR 489 CD2 Distance: 4.809428 - Hydrophobic, 42 - A TYR 31 CE2 VS B TYR 489 CE2 Distance: 4.094668 - Hydrophobic, 43 - A TYR 32 OH VS B GLY 485 O Distance: 4.886457 - Hydrogen Bonds, 44 - A TYR 32 CG VS B TYR 489 CG Distance: 5.968253 - Aromatic Stacking, 45 - A TYR 32 CD1 VS B TYR 489 CE1 Distance: 5.145998 - Hydrophobic, 46 - A TYR 32 CE1 VS B TYR 489 CD1 Distance: 5.196951 - Hydrophobic, 47 - A TYR 32 CE1 VS B TYR 489 CE1 Distance: 4.116098 - Hydrophobic, 48 - A TYR 32 CE1 VS B TYR 489 CE2 Distance: 5.419668 - Hydrophobic, 49 - A TYR 32 CE2 VS B TYR 489 CE1 Distance: 5.020892 - Hydrophobic, 50 - A TYR 32 OH VS B TYR 489 OH Distance: 3.867605 - Hydrogen Bonds, 51 - A TRP 52 CZ2 VS B TYR 449 CD1 Distance: 4.860623 - Hydrophobic, 52 - A TRP 52 CZ2 VS B TYR 449 CE1 Distance: 4.366022 - Hydrophobic, 53 - A TRP 52 CZ3 VS B TYR 449 CE1 Distance: 5.169413 - Hydrophobic, 54 - A TRP 52 CH2 VS B TYR 449 CD1 Distance: 4.842097 - Hydrophobic, 55 - A TRP 52 CH2 VS B TYR 449 CE1 Distance: 4.007852 - Hydrophobic, 56 - A TRP 52 NE1 VS B TYR 453 OH Distance: 4.729454 - Hydrogen Bonds, 57 - A TRP 52 NE1 VS B SER 494 O Distance: 3.178728 - Hydrogen Bonds, 58 - A TRP 52 NE1 VS B TYR 495 O Distance: 3.369554 - Hydrogen Bonds, 59 - A TYR 53 OH VS B LYS 417 NZ Distance: 3.643216 - Hydrogen Bonds, 60 - A TYR 53 CG VS B TYR 453 CE1 Distance: 6.911516 - Aromatic Stacking, 61 - A TYR 53 CE1 VS B TYR 453 CE1 Distance: 4.987339 - Hydrophobic, 62 - A TYR 53 OH VS B TYR 453 OH Distance: 3.299783 - Hydrogen Bonds, 63 - A TYR 53 CG VS B LEU 455 CD2 Distance: 4.922846 - Hydrophobic, 64 - A TYR 53 CD1 VS B LEU 455 CD2 Distance: 4.876062 - Hydrophobic, 65 - A TYR 53 CD2 VS B LEU 455 CG Distance: 5.390614 - Hydrophobic, 66 - A TYR 53 CD2 VS B LEU 455 CD1 Distance: 5.045342 - Hydrophobic, 67 - A TYR 53 CD2 VS B LEU 455 CD2 Distance: 4.592521 - Hydrophobic, 68 - A TYR 53 CE1 VS B LEU 455 CG Distance: 5.412892 - Hydrophobic, 69 - A TYR 53 CE1 VS B LEU 455 CD1 Distance: 4.878348 - Hydrophobic, 70 - A TYR 53 CE1 VS B LEU 455 CD2 Distance: 4.539100 - Hydrophobic, 71 - A TYR 53 CE2 VS B LEU 455 CG Distance: 4.735848 - Hydrophobic, 72 - A TYR 53 CE2 VS B LEU 455 CD1 Distance: 4.060277 - Hydrophobic, 73 - A TYR 53 CE2 VS B LEU 455 CD2 Distance: 4.224084 - Hydrophobic, 74 - A TYR 53 CD1 VS B GLN 493 CG Distance: 5.210828 - Hydrophobic, 75 - A TYR 53 CE1 VS B GLN 493 CG Distance: 4.883408 - Hydrophobic, 76 - A ASP 54 OD1 VS B ARG 403 NE Distance: 6.628589 - Attractive, 77 - A ASP 54 OD1 VS B ARG 403 CZ Distance: 5.397124 - Attractive, 78 - A ASP 54 OD1 VS B ARG 403 NH1 Distance: 4.428462 - Attractive, Hydrogen Bonds, 79 - A ASP 54 OD1 VS B ARG 403 NH2 Distance: 5.403931 - Attractive, 80 - A ASP 54 OD2 VS B ARG 403 NE Distance: 5.330881 - Attractive, 81 - A ASP 54 OD2 VS B ARG 403 CZ Distance: 4.056533 - Attractive, 82 - A ASP 54 OD2 VS B ARG 403 NH1 Distance: 3.229095 - Attractive, Hydrogen Bonds, 83 - A ASP 54 OD2 VS B ARG 403 NH2 Distance: 3.985302 - Attractive, Hydrogen Bonds, 84 - A ASP 54 OD2 VS B ASP 405 OD2 Distance: 6.979422 - Repulsive, 85 - A ASP 54 OD2 VS B GLU 406 OE2 Distance: 6.639805 - Repulsive, 86 - A ASP 54 OD2 VS B LYS 417 NZ Distance: 5.469785 - Attractive, 87 - A SER 56 OG VS B ARG 403 NH1 Distance: 3.467868 - Hydrogen Bonds, 88 - A SER 56 O VS B ASN 501 ND2 Distance: 4.822558 - Hydrogen Bonds, 89 - A SER 56 N VS B TYR 505 OH Distance: 4.818145 - Hydrogen Bonds, 90 - A ASN 57 ND2 VS B TYR 495 O Distance: 3.045707 - Hydrogen Bonds, 91 - A ASN 57 ND2 VS B GLY 496 O Distance: 2.803293 - Hydrogen Bonds, 92 - A ASN 57 OD1 VS B GLN 498 NE2 Distance: 3.366636 - Hydrogen Bonds, 93 - A ASN 57 OD1 VS B ASN 501 ND2 Distance: 3.400399 - Hydrogen Bonds, 94 - A ARG 58 O VS B GLN 498 NE2 Distance: 3.137488 - Hydrogen Bonds, 95 - A PHE 59 CG VS B TYR 449 CD1 Distance: 6.612048 - Aromatic Stacking, 96 - A PHE 59 CE1 VS B TYR 449 CE1 Distance: 5.103008 - Hydrophobic, 97 - A PHE 59 CZ VS B TYR 449 CE1 Distance: 5.148277 - Hydrophobic, 98 - A PHE 59 CD2 VS B GLN 498 CB Distance: 5.363600 - Hydrophobic, 99 - A PHE 59 CD2 VS B GLN 498 CG Distance: 5.170319 - Hydrophobic, 100 - A PHE 59 CE1 VS B GLN 498 CB Distance: 5.098126 - Hydrophobic, 101 - A PHE 59 CE2 VS B GLN 498 CB Distance: 4.222059 - Hydrophobic, 102 - A PHE 59 CE2 VS B GLN 498 CG Distance: 4.306739 - Hydrophobic, 103 - A PHE 59 CZ VS B GLN 498 CB Distance: 4.058274 - Hydrophobic, 104 - A PHE 59 CZ VS B GLN 498 CG Distance: 4.516647 - Hydrophobic, 105 - A PRO 100 CB VS B TYR 489 CD1 Distance: 5.273708 - Hydrophobic, 106 - A PRO 101 CB VS B LEU 455 CG Distance: 5.489100 - Hydrophobic, 107 - A PRO 101 CB VS B LEU 455 CD2 Distance: 4.439868 - Hydrophobic, 108 - A PRO 101 CG VS B LEU 455 CD2 Distance: 4.781862 - Hydrophobic, 109 - A PRO 101 CB VS B PHE 456 CD2 Distance: 5.103843 - Hydrophobic, 110 - A PRO 101 CB VS B PHE 456 CE2 Distance: 3.976499 - Hydrophobic, 111 - A PRO 101 CB VS B PHE 456 CZ Distance: 4.415574 - Hydrophobic, 112 - A PRO 101 CG VS B PHE 456 CD2 Distance: 5.367840 - Hydrophobic, 113 - A PRO 101 CG VS B PHE 456 CE1 Distance: 5.358171 - Hydrophobic, 114 - A PRO 101 CG VS B PHE 456 CE2 Distance: 4.074267 - Hydrophobic, 115 - A PRO 101 CG VS B PHE 456 CZ Distance: 4.060460 - Hydrophobic, 116 - A PRO 101 CB VS B TYR 489 CB Distance: 4.349429 - Hydrophobic, 117 - A PRO 101 CB VS B TYR 489 CG Distance: 4.621652 - Hydrophobic, 118 - A PRO 101 CB VS B TYR 489 CD1 Distance: 4.787657 - Hydrophobic, 119 - A PRO 101 CB VS B TYR 489 CD2 Distance: 5.301787 - Hydrophobic, 120 - A PRO 101 CG VS B TYR 489 CB Distance: 4.276514 - Hydrophobic, 121 - A PRO 101 CG VS B TYR 489 CG Distance: 4.047809 - Hydrophobic, 122 - A PRO 101 CG VS B TYR 489 CD1 Distance: 4.022306 - Hydrophobic, 123 - A PRO 101 CG VS B TYR 489 CD2 Distance: 4.557711 - Hydrophobic, 124 - A PRO 101 CG VS B TYR 489 CE1 Distance: 4.512654 - Hydrophobic, 125 - A PRO 101 CG VS B TYR 489 CE2 Distance: 4.995428 - Hydrophobic, 126 - A PRO 101 O VS B PHE 490 N Distance: 4.080206 - Hydrogen Bonds, 127 - A PRO 101 CB VS B GLN 493 CB Distance: 5.467325 - Hydrophobic, 128 - A GLY 102 N VS B PHE 490 O Distance: 4.528192 - Hydrogen Bonds, 129 - A GLY 102 N VS B LEU 492 O Distance: 4.025891 - Hydrogen Bonds, 130 - A GLY 102 N VS B GLN 493 OE1 Distance: 3.275655 - Hydrogen Bonds, 131 - A LEU 103 CD1 VS B GLU 484 CG Distance: 4.581776 - Hydrophobic, 132 - A LEU 103 CB VS B PHE 490 CB Distance: 5.116715 - Hydrophobic, 133 - A LEU 103 CB VS B PHE 490 CG Distance: 5.008799 - Hydrophobic, 134 - A LEU 103 CB VS B PHE 490 CD2 Distance: 5.010611 - Hydrophobic, 135 - A LEU 103 CB VS B PHE 490 CE2 Distance: 5.494300 - Hydrophobic, 136 - A LEU 103 CG VS B PHE 490 CB Distance: 4.044366 - Hydrophobic, 137 - A LEU 103 CG VS B PHE 490 CG Distance: 3.703393 - Hydrophobic, 138 - A LEU 103 CG VS B PHE 490 CD1 Distance: 4.020819 - Hydrophobic, 139 - A LEU 103 CG VS B PHE 490 CD2 Distance: 3.861459 - Hydrophobic, 140 - A LEU 103 CG VS B PHE 490 CE1 Distance: 4.446314 - Hydrophobic, 141 - A LEU 103 CG VS B PHE 490 CE2 Distance: 4.300670 - Hydrophobic, 142 - A LEU 103 CG VS B PHE 490 CZ Distance: 4.578280 - Hydrophobic, 143 - A LEU 103 CD1 VS B PHE 490 CB Distance: 3.925115 - Hydrophobic, 144 - A LEU 103 CD1 VS B PHE 490 CG Distance: 3.827439 - Hydrophobic, 145 - A LEU 103 CD1 VS B PHE 490 CD1 Distance: 3.830486 - Hydrophobic, 146 - A LEU 103 CD1 VS B PHE 490 CD2 Distance: 4.470114 - Hydrophobic, 147 - A LEU 103 CD1 VS B PHE 490 CE1 Distance: 4.467875 - Hydrophobic, 148 - A LEU 103 CD1 VS B PHE 490 CE2 Distance: 5.031555 - Hydrophobic, 149 - A LEU 103 CD1 VS B PHE 490 CZ Distance: 5.033343 - Hydrophobic, 150 - A LEU 103 CD2 VS B PHE 490 CB Distance: 4.904100 - Hydrophobic, 151 - A LEU 103 CD2 VS B PHE 490 CG Distance: 4.104997 - Hydrophobic, 152 - A LEU 103 CD2 VS B PHE 490 CD1 Distance: 4.115588 - Hydrophobic, 153 - A LEU 103 CD2 VS B PHE 490 CD2 Distance: 4.015118 - Hydrophobic, 154 - A LEU 103 CD2 VS B PHE 490 CE1 Distance: 4.042900 - Hydrophobic, 155 - A LEU 103 CD2 VS B PHE 490 CE2 Distance: 3.931958 - Hydrophobic, 156 - A LEU 103 CD2 VS B PHE 490 CZ Distance: 3.948233 - Hydrophobic, 157 - A LEU 103 N VS B LEU 492 O Distance: 4.198375 - Hydrogen Bonds, 158 - A ARG 104 CG VS B TYR 449 CB Distance: 4.803393 - Hydrophobic, 159 - A ARG 104 CG VS B TYR 449 CG Distance: 4.905589 - Hydrophobic, 160 - A ARG 104 CG VS B TYR 449 CD1 Distance: 5.155958 - Hydrophobic, 161 - A ARG 104 CG VS B TYR 449 CD2 Distance: 5.423890 - Hydrophobic, 162 - A ARG 104 NE VS B TYR 449 O Distance: 4.873031 - Hydrogen Bonds, 163 - A ARG 104 NH2 VS B TYR 449 O Distance: 4.405315 - Hydrogen Bonds, 164 - A ARG 104 NH2 VS B ASN 450 OD1 Distance: 4.077698 - Hydrogen Bonds, 165 - A PHE 105 CG VS B TYR 449 CG Distance: 5.583124 - Aromatic Stacking, 166 - A PHE 105 CD2 VS B TYR 449 CE1 Distance: 5.238618 - Hydrophobic, 167 - A PHE 105 CD2 VS B TYR 449 CE2 Distance: 5.436007 - Hydrophobic, 168 - A PHE 105 CE1 VS B TYR 449 CE1 Distance: 5.114785 - Hydrophobic, 169 - A PHE 105 CE2 VS B TYR 449 CG Distance: 5.359436 - Hydrophobic, 170 - A PHE 105 CE2 VS B TYR 449 CD1 Distance: 4.855697 - Hydrophobic, 171 - A PHE 105 CE2 VS B TYR 449 CD2 Distance: 5.146930 - Hydrophobic, 172 - A PHE 105 CE2 VS B TYR 449 CE1 Distance: 4.030744 - Hydrophobic, 173 - A PHE 105 CE2 VS B TYR 449 CE2 Distance: 4.377101 - Hydrophobic, 174 - A PHE 105 CZ VS B TYR 449 CD1 Distance: 4.957095 - Hydrophobic, 175 - A PHE 105 CZ VS B TYR 449 CE1 Distance: 3.947014 - Hydrophobic, 176 - A PHE 105 CZ VS B TYR 449 CE2 Distance: 4.897713 - Hydrophobic, 177 - A ARG 106 NE VS B GLU 484 OE1 Distance: 5.303548 - Attractive, 178 - A ARG 106 NE VS B GLU 484 OE2 Distance: 4.562067 - Attractive, Hydrogen Bonds, 179 - A ARG 106 CZ VS B GLU 484 OE1 Distance: 4.069666 - Attractive, 180 - A ARG 106 CZ VS B GLU 484 OE2 Distance: 3.245218 - Attractive, 181 - A ARG 106 NH1 VS B GLU 484 OE1 Distance: 4.035537 - Attractive, Hydrogen Bonds, 182 - A ARG 106 NH1 VS B GLU 484 OE2 Distance: 2.881706 - Attractive, Hydrogen Bonds, 183 - A ARG 106 NH2 VS B GLU 484 OE1 Distance: 3.248605 - Attractive, Hydrogen Bonds, 184 - A ARG 106 NH2 VS B GLU 484 OE2 Distance: 2.784365 - Attractive, Hydrogen Bonds, 185 - A TYR 109 CE2 VS B PHE 486 CD1 Distance: 5.208130 - Hydrophobic, 186 - A HIS 166 NE2 VS B ASN 450 OD1 Distance: 4.033248 - Hydrogen Bonds, 187 - A TYR 170 CG VS B PHE 490 CD1 Distance: 6.552713 - Aromatic Stacking, 188 - A TYR 170 CE2 VS B PHE 490 CE1 Distance: 4.995551 - Hydrophobic, 189 - A TYR 170 CE2 VS B PHE 490 CZ Distance: 4.969105 - Hydrophobic, 190 - A TYR 189 CE2 VS B GLU 484 CB Distance: 4.782811 - Hydrophobic, 191 - A TYR 189 CE2 VS B GLU 484 CG Distance: 4.863537 - Hydrophobic, 192 - A TYR 189 OH VS B GLU 484 N Distance: 4.284435 - Hydrogen Bonds, 193 - A TYR 189 OH VS B GLU 484 O Distance: 4.033953 - Hydrogen Bonds, 194 - A TYR 189 OH VS B GLU 484 OE1 Distance: 4.237320 - Hydrogen Bonds, 195 - A GLN 233 CB VS B TYR 449 CD2 Distance: 5.005660 - Hydrophobic, 196 - A GLN 233 CB VS B TYR 449 CE2 Distance: 4.509028 - Hydrophobic, 197 - A THR 234 N VS B GLY 446 O Distance: 4.441868 - Hydrogen Bonds, 198 - A THR 234 OG1 VS B GLY 446 O Distance: 2.949769 - Hydrogen Bonds, 199 - A THR 234 N VS B TYR 449 OH Distance: 4.145196 - Hydrogen Bonds, 200 - A THR 234 OG1 VS B TYR 449 OH Distance: 3.794485 - Hydrogen Bonds, 201 - A THR 234 CG2 VS B TYR 449 CE2 Distance: 5.273061 - Hydrophobic,