VIRAL PROTEIN CRYO-EM STRUCTURE OF THE SARS-COV-2 SPIKE PROTEIN BOUND TO NEUTRALIZING SYBODIES (SB23) 2-UP CONFORMATION: 0 - B ARG 346 CZ VS E GLU 32 OE2 Distance: 6.856878 - Attractive, 1 - B ARG 346 NH1 VS E GLU 32 OE2 Distance: 6.499565 - Attractive, 2 - B ARG 346 NH2 VS E GLU 32 OE2 Distance: 6.540559 - Attractive, 3 - B LYS 444 NZ VS E ARG 45 NH2 Distance: 6.134364 - Repulsive, 4 - B LYS 444 CB VS E TRP 103 CG Distance: 5.445833 - Hydrophobic, 5 - B LYS 444 CB VS E TRP 103 CD2 Distance: 4.943489 - Hydrophobic, 6 - B LYS 444 CB VS E TRP 103 CE3 Distance: 5.375080 - Hydrophobic, 7 - B LYS 444 CB VS E TRP 103 CZ2 Distance: 4.327893 - Hydrophobic, 8 - B LYS 444 CB VS E TRP 103 CZ3 Distance: 5.295964 - Hydrophobic, 9 - B LYS 444 CB VS E TRP 103 CH2 Distance: 4.796263 - Hydrophobic, 10 - B LYS 444 CG VS E TRP 103 CG Distance: 4.742668 - Hydrophobic, 11 - B LYS 444 CG VS E TRP 103 CD2 Distance: 4.391653 - Hydrophobic, 12 - B LYS 444 CG VS E TRP 103 CE3 Distance: 4.731552 - Hydrophobic, 13 - B LYS 444 CG VS E TRP 103 CZ2 Distance: 4.546619 - Hydrophobic, 14 - B LYS 444 CG VS E TRP 103 CZ3 Distance: 4.939540 - Hydrophobic, 15 - B LYS 444 CG VS E TRP 103 CH2 Distance: 4.850545 - Hydrophobic, 16 - B LYS 444 CD VS E TRP 103 CB Distance: 5.268041 - Hydrophobic, 17 - B LYS 444 CD VS E TRP 103 CG Distance: 4.715671 - Hydrophobic, 18 - B LYS 444 CD VS E TRP 103 CD2 Distance: 4.824681 - Hydrophobic, 19 - B LYS 444 CD VS E TRP 103 CE3 Distance: 5.437628 - Hydrophobic, 20 - B LYS 444 CD VS E TRP 103 CZ2 Distance: 5.417794 - Hydrophobic, 21 - B LYS 444 NZ VS E GLU 105 OE1 Distance: 6.943160 - Attractive, 22 - B VAL 445 O VS E ARG 45 NE Distance: 4.235291 - Hydrogen Bonds, 23 - B VAL 445 O VS E ARG 45 NH2 Distance: 3.412280 - Hydrogen Bonds, 24 - B GLY 446 N VS E ARG 45 O Distance: 4.448823 - Hydrogen Bonds, 25 - B GLY 446 O VS E GLU 46 N Distance: 4.232638 - Hydrogen Bonds, 26 - B GLY 446 O VS E TRP 47 N Distance: 4.095847 - Hydrogen Bonds, 27 - B GLY 447 O VS E TYR 37 OH Distance: 3.838791 - Hydrogen Bonds, 28 - B GLY 447 N VS E ARG 45 O Distance: 4.842207 - Hydrogen Bonds, 29 - B ASN 448 CB VS E TRP 103 CZ2 Distance: 5.169504 - Hydrophobic, 30 - B ASN 448 CB VS E TRP 103 CH2 Distance: 5.317734 - Hydrophobic, 31 - B TYR 449 O VS E HIS 35 NE2 Distance: 4.042453 - Hydrogen Bonds, 32 - B TYR 449 N VS E TYR 37 OH Distance: 4.670952 - Hydrogen Bonds, 33 - B TYR 449 CD1 VS E TYR 37 CE2 Distance: 4.834071 - Hydrophobic, 34 - B TYR 449 CE1 VS E TYR 37 CE2 Distance: 5.333960 - Hydrophobic, 35 - B TYR 449 CB VS E TRP 47 CB Distance: 5.026456 - Hydrophobic, 36 - B TYR 449 CB VS E TRP 47 CG Distance: 4.436237 - Hydrophobic, 37 - B TYR 449 CB VS E TRP 47 CD2 Distance: 4.417244 - Hydrophobic, 38 - B TYR 449 CB VS E TRP 47 CE3 Distance: 4.945761 - Hydrophobic, 39 - B TYR 449 CB VS E TRP 47 CZ2 Distance: 5.003262 - Hydrophobic, 40 - B TYR 449 CB VS E TRP 47 CZ3 Distance: 5.421003 - Hydrophobic, 41 - B TYR 449 CB VS E TRP 47 CH2 Distance: 5.444468 - Hydrophobic, 42 - B TYR 449 CG VS E TRP 47 CB Distance: 4.244897 - Hydrophobic, 43 - B TYR 449 CG VS E TRP 47 CG Distance: 3.960326 - Hydrophobic, 44 - B TYR 449 CG VS E TRP 47 CG Distance: 4.312166 - Aromatic Stacking, 45 - B TYR 449 CG VS E TRP 47 CD2 Distance: 3.901232 - Hydrophobic, 46 - B TYR 449 CG VS E TRP 47 CE3 Distance: 4.132246 - Hydrophobic, 47 - B TYR 449 CG VS E TRP 47 CZ2 Distance: 5.028366 - Hydrophobic, 48 - B TYR 449 CG VS E TRP 47 CZ3 Distance: 4.772102 - Hydrophobic, 49 - B TYR 449 CG VS E TRP 47 CH2 Distance: 5.178239 - Hydrophobic, 50 - B TYR 449 CD1 VS E TRP 47 CB Distance: 3.688010 - Hydrophobic, 51 - B TYR 449 CD1 VS E TRP 47 CG Distance: 3.893943 - Hydrophobic, 52 - B TYR 449 CD1 VS E TRP 47 CD2 Distance: 4.237279 - Hydrophobic, 53 - B TYR 449 CD1 VS E TRP 47 CE3 Distance: 4.522495 - Hydrophobic, 54 - B TYR 449 CD1 VS E TRP 47 CZ3 Distance: 5.454079 - Hydrophobic, 55 - B TYR 449 CD2 VS E TRP 47 CB Distance: 4.652562 - Hydrophobic, 56 - B TYR 449 CD2 VS E TRP 47 CG Distance: 4.297865 - Hydrophobic, 57 - B TYR 449 CD2 VS E TRP 47 CD2 Distance: 3.803064 - Hydrophobic, 58 - B TYR 449 CD2 VS E TRP 47 CE3 Distance: 3.571774 - Hydrophobic, 59 - B TYR 449 CD2 VS E TRP 47 CZ2 Distance: 4.705407 - Hydrophobic, 60 - B TYR 449 CD2 VS E TRP 47 CZ3 Distance: 3.946774 - Hydrophobic, 61 - B TYR 449 CD2 VS E TRP 47 CH2 Distance: 4.496610 - Hydrophobic, 62 - B TYR 449 CE1 VS E TRP 47 CB Distance: 3.602452 - Hydrophobic, 63 - B TYR 449 CE1 VS E TRP 47 CG Distance: 4.184504 - Hydrophobic, 64 - B TYR 449 CE1 VS E TRP 47 CD2 Distance: 4.476733 - Hydrophobic, 65 - B TYR 449 CE1 VS E TRP 47 CE3 Distance: 4.441267 - Hydrophobic, 66 - B TYR 449 CE1 VS E TRP 47 CZ3 Distance: 5.452621 - Hydrophobic, 67 - B TYR 449 CE2 VS E TRP 47 CB Distance: 4.589805 - Hydrophobic, 68 - B TYR 449 CE2 VS E TRP 47 CG Distance: 4.565888 - Hydrophobic, 69 - B TYR 449 CE2 VS E TRP 47 CD2 Distance: 4.067836 - Hydrophobic, 70 - B TYR 449 CE2 VS E TRP 47 CE3 Distance: 3.464451 - Hydrophobic, 71 - B TYR 449 CE2 VS E TRP 47 CZ2 Distance: 5.324479 - Hydrophobic, 72 - B TYR 449 CE2 VS E TRP 47 CZ3 Distance: 3.937826 - Hydrophobic, 73 - B TYR 449 CE2 VS E TRP 47 CH2 Distance: 4.858175 - Hydrophobic, 74 - B TYR 449 O VS E TYR 52 OH Distance: 3.577216 - Hydrogen Bonds, 75 - B ASN 450 N VS E HIS 35 NE2 Distance: 4.296719 - Hydrogen Bonds, 76 - B ASN 450 OD1 VS E HIS 35 ND1 Distance: 4.105233 - Hydrogen Bonds, 77 - B ASN 450 OD1 VS E HIS 35 NE2 Distance: 2.591680 - Hydrogen Bonds, 78 - B ASN 450 ND2 VS E HIS 35 NE2 Distance: 4.489495 - Hydrogen Bonds, 79 - B ASN 450 ND2 VS E GLN 99 OE1 Distance: 2.468605 - Hydrogen Bonds, 80 - B LEU 452 CB VS E TYR 52 CE2 Distance: 5.098739 - Hydrophobic, 81 - B LEU 452 CG VS E TYR 52 CD2 Distance: 4.576616 - Hydrophobic, 82 - B LEU 452 CG VS E TYR 52 CE1 Distance: 5.184939 - Hydrophobic, 83 - B LEU 452 CG VS E TYR 52 CE2 Distance: 3.720629 - Hydrophobic, 84 - B LEU 452 CD1 VS E TYR 52 CD2 Distance: 5.168112 - Hydrophobic, 85 - B LEU 452 CD1 VS E TYR 52 CE2 Distance: 4.086099 - Hydrophobic, 86 - B LEU 452 CD2 VS E TYR 52 CG Distance: 5.264638 - Hydrophobic, 87 - B LEU 452 CD2 VS E TYR 52 CD1 Distance: 5.158291 - Hydrophobic, 88 - B LEU 452 CD2 VS E TYR 52 CD2 Distance: 4.561292 - Hydrophobic, 89 - B LEU 452 CD2 VS E TYR 52 CE1 Distance: 4.361374 - Hydrophobic, 90 - B LEU 452 CD2 VS E TYR 52 CE2 Distance: 3.628984 - Hydrophobic, 91 - B LEU 452 CG VS E LEU 59 CD2 Distance: 4.892764 - Hydrophobic, 92 - B LEU 452 CD1 VS E LEU 59 CG Distance: 4.997358 - Hydrophobic, 93 - B LEU 452 CD1 VS E LEU 59 CD1 Distance: 5.006297 - Hydrophobic, 94 - B LEU 452 CD1 VS E LEU 59 CD2 Distance: 3.743974 - Hydrophobic, 95 - B LEU 452 CD2 VS E LEU 59 CD2 Distance: 5.395850 - Hydrophobic, 96 - B THR 470 O VS E TRP 57 NE1 Distance: 4.799984 - Hydrogen Bonds, 97 - B THR 470 OG1 VS E TRP 57 NE1 Distance: 4.141795 - Hydrogen Bonds, 98 - B THR 470 CG2 VS E TRP 57 CE3 Distance: 5.236888 - Hydrophobic, 99 - B THR 470 CG2 VS E TRP 57 CZ2 Distance: 4.907872 - Hydrophobic, 100 - B THR 470 CG2 VS E TRP 57 CZ3 Distance: 4.560022 - Hydrophobic, 101 - B THR 470 CG2 VS E TRP 57 CH2 Distance: 4.382179 - Hydrophobic, 102 - B GLU 484 OE2 VS E LYS 65 NZ Distance: 5.875859 - Attractive, 103 - B PHE 490 CG VS E TRP 57 CG Distance: 6.876541 - Aromatic Stacking, 104 - B PHE 490 CE1 VS E TRP 57 CB Distance: 4.651931 - Hydrophobic, 105 - B PHE 490 CE1 VS E TRP 57 CG Distance: 5.085483 - Hydrophobic, 106 - B PHE 490 CE2 VS E TRP 57 CB Distance: 4.801337 - Hydrophobic, 107 - B PHE 490 CE2 VS E TRP 57 CG Distance: 5.355726 - Hydrophobic, 108 - B PHE 490 CZ VS E TRP 57 CB Distance: 3.884022 - Hydrophobic, 109 - B PHE 490 CZ VS E TRP 57 CG Distance: 4.427016 - Hydrophobic, 110 - B PHE 490 CZ VS E TRP 57 CD2 Distance: 5.329064 - Hydrophobic, 111 - B PHE 490 CG VS E LEU 59 CG Distance: 5.092500 - Hydrophobic, 112 - B PHE 490 CG VS E LEU 59 CD1 Distance: 5.029486 - Hydrophobic, 113 - B PHE 490 CD1 VS E LEU 59 CG Distance: 5.497470 - Hydrophobic, 114 - B PHE 490 CD1 VS E LEU 59 CD1 Distance: 5.214542 - Hydrophobic, 115 - B PHE 490 CD2 VS E LEU 59 CG Distance: 4.431275 - Hydrophobic, 116 - B PHE 490 CD2 VS E LEU 59 CD1 Distance: 4.230803 - Hydrophobic, 117 - B PHE 490 CD2 VS E LEU 59 CD2 Distance: 4.857164 - Hydrophobic, 118 - B PHE 490 CE1 VS E LEU 59 CG Distance: 5.322785 - Hydrophobic, 119 - B PHE 490 CE1 VS E LEU 59 CD1 Distance: 4.678849 - Hydrophobic, 120 - B PHE 490 CE2 VS E LEU 59 CG Distance: 4.211438 - Hydrophobic, 121 - B PHE 490 CE2 VS E LEU 59 CD1 Distance: 3.548687 - Hydrophobic, 122 - B PHE 490 CE2 VS E LEU 59 CD2 Distance: 4.764600 - Hydrophobic, 123 - B PHE 490 CZ VS E LEU 59 CG Distance: 4.700030 - Hydrophobic, 124 - B PHE 490 CZ VS E LEU 59 CD1 Distance: 3.820076 - Hydrophobic, 125 - B LEU 492 CD1 VS E TYR 52 CD2 Distance: 5.487616 - Hydrophobic, 126 - B LEU 492 CD1 VS E TRP 57 CD2 Distance: 5.419545 - Hydrophobic, 127 - B LEU 492 CD1 VS E TRP 57 CE3 Distance: 4.914169 - Hydrophobic, 128 - B LEU 492 CD1 VS E TRP 57 CZ3 Distance: 5.291870 - Hydrophobic, 129 - B LEU 492 CB VS E LEU 59 CD1 Distance: 5.357411 - Hydrophobic, 130 - B LEU 492 CB VS E LEU 59 CD2 Distance: 5.212450 - Hydrophobic,