VIRAL PROTEIN, IMMUNE SYSTEM
EM STRUCTURE OF SARS-COV-2 SPIKE GLYCOPROTEIN (ALL RBD DOWN) IN COMPLEX WITH COVOX-159:

0 - B GLN 14 OE1  VS H THR 28 N   
Distance: 4.592534 - Hydrogen Bonds, 
1 - B GLN 14 N    VS H TYR 32 OH  
Distance: 4.859992 - Hydrogen Bonds, 
2 - B GLN 14 CB   VS H TYR 32 CE1 
Distance: 4.549268 - Hydrophobic, 
3 - B GLN 14 CB   VS H TYR 32 CE2 
Distance: 4.555154 - Hydrophobic, 
4 - B GLN 14 CG   VS H TYR 32 CE1 
Distance: 4.964057 - Hydrophobic, 
5 - B GLN 14 OE1  VS H TYR 32 OH  
Distance: 2.598585 - Hydrogen Bonds, 
6 - B GLN 14 NE2  VS H TYR 32 OH  
Distance: 4.622958 - Hydrogen Bonds, 
7 - B TYR 144 CG   VS H TYR 53 CG  
Distance: 5.410380 - Aromatic Stacking, 
8 - B TYR 144 CG   VS H TYR 53 CE1 
Distance: 5.482014 - Hydrophobic, 
9 - B TYR 144 CG   VS H TYR 53 CE2 
Distance: 5.458348 - Hydrophobic, 
10 - B TYR 144 CD1  VS H TYR 53 CE1 
Distance: 5.152449 - Hydrophobic, 
11 - B TYR 144 CD1  VS H TYR 53 CE2 
Distance: 4.840922 - Hydrophobic, 
12 - B TYR 144 CD2  VS H TYR 53 CE2 
Distance: 5.452485 - Hydrophobic, 
13 - B TYR 144 CE1  VS H TYR 53 CD2 
Distance: 5.490229 - Hydrophobic, 
14 - B TYR 144 CE1  VS H TYR 53 CE1 
Distance: 5.119686 - Hydrophobic, 
15 - B TYR 144 CE1  VS H TYR 53 CE2 
Distance: 4.169484 - Hydrophobic, 
16 - B TYR 144 CE2  VS H TYR 53 CE2 
Distance: 4.862236 - Hydrophobic, 
17 - B TYR 144 OH   VS H TYR 53 OH  
Distance: 4.254757 - Hydrogen Bonds, 
18 - B TYR 145 O    VS H TYR 53 OH  
Distance: 3.680569 - Hydrogen Bonds, 
19 - B HIS 146 N    VS H TYR 53 OH  
Distance: 4.892475 - Hydrogen Bonds, 
20 - B HIS 146 CG   VS H TYR 53 CG  
Distance: 6.409729 - Aromatic Stacking, 
21 - B HIS 146 N    VS H ASP 54 OD2 
Distance: 4.827236 - Hydrogen Bonds, 
22 - B HIS 146 CB   VS H ASP 54 CB  
Distance: 5.350561 - Hydrophobic, 
23 - B HIS 146 ND1  VS H ASP 54 OD1 
Distance: 6.009730 - Attractive, 
24 - B HIS 146 ND1  VS H ASP 54 OD2 
Distance: 4.490517 - Attractive, Hydrogen Bonds, 
25 - B HIS 146 NE2  VS H ASP 54 O   
Distance: 4.474902 - Hydrogen Bonds, 
26 - B HIS 146 NE2  VS H ASP 54 OD1 
Distance: 5.359620 - Attractive, 
27 - B HIS 146 NE2  VS H ASP 54 OD2 
Distance: 4.206888 - Attractive, Hydrogen Bonds, 
28 - B LYS 147 N    VS H ASP 54 OD2 
Distance: 4.851424 - Hydrogen Bonds, 
29 - B LYS 147 NZ   VS H ASP 54 OD1 
Distance: 6.931630 - Attractive, 
30 - B LYS 147 NZ   VS H GLY 56 O   
Distance: 3.686239 - Hydrogen Bonds, 
31 - B LYS 147 NZ   VS H ASN 57 OD1 
Distance: 2.117966 - Hydrogen Bonds, 
32 - B ASN 148 OD1  VS H GLY 56 N   
Distance: 4.819109 - Hydrogen Bonds, 
33 - B PRO 251 O    VS H TYR 108 OH  
Distance: 4.801261 - Hydrogen Bonds, 
34 - B GLY 252 N    VS H TYR 108 OH  
Distance: 4.528544 - Hydrogen Bonds, 
35 - B GLY 252 O    VS H TYR 108 OH  
Distance: 4.704960 - Hydrogen Bonds, 
36 - B ASP 253 N    VS H TYR 108 OH  
Distance: 2.765508 - Hydrogen Bonds, 
37 - B ASP 253 O    VS H TYR 108 OH  
Distance: 4.834497 - Hydrogen Bonds, 
38 - B ASP 253 CB   VS H TYR 108 CE1 
Distance: 5.006921 - Hydrophobic, 
39 - B ASP 253 CB   VS H TYR 108 CE2 
Distance: 4.887508 - Hydrophobic, 
40 - B ASP 253 OD1  VS H TYR 108 OH  
Distance: 4.795664 - Hydrogen Bonds, 
41 - B ASP 253 OD2  VS H TYR 108 OH  
Distance: 4.037497 - Hydrogen Bonds,