VIRAL PROTEIN/IMMUNE SYSTEM SARS-COV-2 S/S2M11/S2M28 LOCAL REFINEMENT: 0 - A VAL 16 CG2 VS L ILE 93 CG1 Distance: 5.352595 - Hydrophobic, 1 - A PHE 140 CD1 VS L ILE 93 CD1 Distance: 5.136113 - Hydrophobic, 2 - A PHE 140 CE1 VS L ILE 93 CG1 Distance: 4.991043 - Hydrophobic, 3 - A PHE 140 CE1 VS L ILE 93 CD1 Distance: 3.952357 - Hydrophobic, 4 - A PHE 140 CE2 VS L ILE 93 CD1 Distance: 5.377374 - Hydrophobic, 5 - A PHE 140 CZ VS L ILE 93 CG1 Distance: 4.779101 - Hydrophobic, 6 - A PHE 140 CZ VS L ILE 93 CD1 Distance: 4.109591 - Hydrophobic, 7 - A TYR 144 CD1 VS L LYS 29 CB Distance: 4.507671 - Hydrophobic, 8 - A TYR 144 CD1 VS L LYS 29 CG Distance: 5.101147 - Hydrophobic, 9 - A TYR 144 CD1 VS L LYS 29 CD Distance: 5.321419 - Hydrophobic, 10 - A TYR 144 CE1 VS L LYS 29 CB Distance: 3.827791 - Hydrophobic, 11 - A TYR 144 CE1 VS L LYS 29 CG Distance: 4.073866 - Hydrophobic, 12 - A TYR 144 CE1 VS L LYS 29 CD Distance: 4.300334 - Hydrophobic, 13 - A TYR 144 CE2 VS L LYS 29 CB Distance: 5.498631 - Hydrophobic, 14 - A TYR 144 CE2 VS L LYS 29 CG Distance: 5.427166 - Hydrophobic, 15 - A TYR 144 CE2 VS L LYS 29 CD Distance: 4.965965 - Hydrophobic, 16 - A TYR 144 OH VS L LYS 29 NZ Distance: 4.307974 - Hydrogen Bonds, 17 - A TYR 144 CG VS L HIS 30 CG Distance: 4.990168 - Aromatic Stacking, 18 - A HIS 146 ND1 VS L ALA 28 O Distance: 3.306540 - Hydrogen Bonds, 19 - A HIS 146 NE2 VS L ALA 28 O Distance: 3.518552 - Hydrogen Bonds, 20 - A HIS 146 N VS L LYS 29 O Distance: 4.669437 - Hydrogen Bonds, 21 - A HIS 146 ND1 VS L LYS 29 N Distance: 4.895411 - Hydrogen Bonds, 22 - A HIS 146 NE2 VS L LYS 29 N Distance: 4.438433 - Hydrogen Bonds, 23 - A HIS 146 NE2 VS L LYS 29 NZ Distance: 6.287100 - Repulsive, 24 - A LYS 147 NZ VS L LEU 27 O Distance: 2.574671 - Hydrogen Bonds, 25 - A LYS 147 N VS L ALA 28 O Distance: 3.943269 - Hydrogen Bonds, 26 - A LYS 147 N VS L LYS 29 O Distance: 2.993583 - Hydrogen Bonds, 27 - A LYS 147 NZ VS L HIS 30 O Distance: 2.923604 - Hydrogen Bonds, 28 - A LYS 147 CB VS L TYR 31 CD1 Distance: 5.446792 - Hydrophobic, 29 - A LYS 147 CB VS L TYR 31 CE1 Distance: 5.335938 - Hydrophobic, 30 - A LYS 147 CG VS L TYR 31 CG Distance: 5.023809 - Hydrophobic, 31 - A LYS 147 CG VS L TYR 31 CD1 Distance: 4.485350 - Hydrophobic, 32 - A LYS 147 CG VS L TYR 31 CD2 Distance: 5.322459 - Hydrophobic, 33 - A LYS 147 CG VS L TYR 31 CE1 Distance: 4.247754 - Hydrophobic, 34 - A LYS 147 CG VS L TYR 31 CE2 Distance: 5.122245 - Hydrophobic, 35 - A LYS 147 CD VS L TYR 31 CB Distance: 4.841031 - Hydrophobic, 36 - A LYS 147 CD VS L TYR 31 CG Distance: 4.294551 - Hydrophobic, 37 - A LYS 147 CD VS L TYR 31 CD1 Distance: 3.722061 - Hydrophobic, 38 - A LYS 147 CD VS L TYR 31 CD2 Distance: 4.947061 - Hydrophobic, 39 - A LYS 147 CD VS L TYR 31 CE1 Distance: 3.903330 - Hydrophobic, 40 - A LYS 147 CD VS L TYR 31 CE2 Distance: 5.085187 - Hydrophobic, 41 - A LYS 147 CD VS L ASP 50 CB Distance: 5.476690 - Hydrophobic, 42 - A LYS 147 NZ VS L ASP 50 OD1 Distance: 3.751623 - Attractive, Hydrogen Bonds, 43 - A LYS 147 NZ VS L ASP 50 OD2 Distance: 2.898672 - Attractive, Hydrogen Bonds, 44 - A LYS 147 NZ VS L SER 65 OG Distance: 4.435029 - Hydrogen Bonds, 45 - A ASN 148 ND2 VS L LEU 27 O Distance: 4.829226 - Hydrogen Bonds, 46 - A ASN 148 N VS L ALA 28 O Distance: 3.392498 - Hydrogen Bonds, 47 - A ASN 148 CB VS L ALA 28 CB Distance: 4.993989 - Hydrophobic, 48 - A ASN 148 ND2 VS L ALA 28 O Distance: 3.489455 - Hydrogen Bonds, 49 - A ASN 148 OD1 VS L GLY 67 N Distance: 4.700197 - Hydrogen Bonds, 50 - A ASN 148 ND2 VS L GLY 67 O Distance: 2.861695 - Hydrogen Bonds, 51 - A SER 155 OG VS L SER 92 O Distance: 3.787298 - Hydrogen Bonds, 52 - A GLU 156 OE2 VS L TYR 2 OH Distance: 4.584963 - Hydrogen Bonds, 53 - A GLU 156 OE2 VS L ASP 91 OD2 Distance: 6.320151 - Repulsive, 54 - A GLU 156 CB VS L ILE 93 CB Distance: 5.358928 - Hydrophobic, 55 - A GLU 156 CB VS L ILE 93 CG1 Distance: 5.344610 - Hydrophobic, 56 - A GLU 156 CB VS L ILE 93 CD1 Distance: 4.840173 - Hydrophobic, 57 - A ARG 158 NH2 VS L ASP 91 OD1 Distance: 6.966205 - Attractive, 58 - A ARG 158 NH2 VS L ASP 91 OD2 Distance: 6.122635 - Attractive, 59 - A ARG 158 CB VS L ILE 93 CD1 Distance: 5.012602 - Hydrophobic, 60 - A ARG 158 CG VS L ILE 93 CG1 Distance: 4.167774 - Hydrophobic, 61 - A ARG 158 CG VS L ILE 93 CD1 Distance: 3.825205 - Hydrophobic, 62 - A ARG 246 NE VS L HIS 30 ND1 Distance: 3.712616 - Repulsive, Hydrogen Bonds, 63 - A ARG 246 NE VS L HIS 30 NE2 Distance: 4.184538 - Repulsive, Hydrogen Bonds, 64 - A ARG 246 CZ VS L HIS 30 ND1 Distance: 3.416763 - Repulsive, 65 - A ARG 246 CZ VS L HIS 30 NE2 Distance: 4.283146 - Repulsive, 66 - A ARG 246 NH1 VS L HIS 30 ND1 Distance: 3.215079 - Repulsive, Hydrogen Bonds, 67 - A ARG 246 NH1 VS L HIS 30 NE2 Distance: 4.684774 - Repulsive, Hydrogen Bonds, 68 - A ARG 246 NH2 VS L HIS 30 ND1 Distance: 4.014936 - Repulsive, Hydrogen Bonds, 69 - A ARG 246 NH2 VS L HIS 30 NE2 Distance: 4.544707 - Repulsive, Hydrogen Bonds, 70 - A ARG 246 NH2 VS L ALA 90 O Distance: 3.566052 - Hydrogen Bonds, 71 - A ARG 246 NE VS L ASP 91 O Distance: 3.278591 - Hydrogen Bonds, 72 - A ARG 246 NE VS L ASP 91 OD1 Distance: 5.991858 - Attractive, 73 - A ARG 246 CZ VS L ASP 91 OD1 Distance: 6.316770 - Attractive, 74 - A ARG 246 NH1 VS L ASP 91 O Distance: 4.701413 - Hydrogen Bonds, 75 - A ARG 246 NH2 VS L ASP 91 O Distance: 2.793575 - Hydrogen Bonds, 76 - A ARG 246 NH2 VS L ASP 91 OD1 Distance: 5.554525 - Attractive, 77 - A ARG 246 NE VS L SER 92 O Distance: 3.848486 - Hydrogen Bonds, 78 - A LEU 249 CD1 VS L ILE 93 CB Distance: 4.927267 - Hydrophobic, 79 - A LEU 249 CD1 VS L ILE 93 CG1 Distance: 4.231521 - Hydrophobic, 80 - A LEU 249 CD1 VS L ILE 93 CD1 Distance: 4.024417 - Hydrophobic, 81 - A PRO 251 CB VS L TRP 97 CZ2 Distance: 5.321668 - Hydrophobic, 82 - A PRO 251 CB VS L TRP 97 CH2 Distance: 5.076675 - Hydrophobic, 83 - A PRO 251 CG VS L TRP 97 CZ2 Distance: 4.380774 - Hydrophobic, 84 - A PRO 251 CG VS L TRP 97 CH2 Distance: 4.509792 - Hydrophobic,