VIRAL PROTEIN/IMMUNE SYSTEM SARS-COV-2 SPIKE IN COMPLEX WITH THE S2E12 NEUTRALIZING ANTIBODY FAB FRAGMENT (LOCAL REFINEMENT OF THE RBD AND FAB VARIABLE DOMAINS): 0 - L TYR 33 OH VS B THR 478 OG1 Distance: 4.775475 - Hydrogen Bonds, 1 - L TYR 33 CD2 VS B PHE 486 CB Distance: 4.412035 - Hydrophobic, 2 - L TYR 33 CD2 VS B PHE 486 CG Distance: 5.157741 - Hydrophobic, 3 - L TYR 33 CD2 VS B PHE 486 CD2 Distance: 4.843426 - Hydrophobic, 4 - L TYR 33 CE2 VS B PHE 486 CB Distance: 4.051740 - Hydrophobic, 5 - L TYR 33 CE2 VS B PHE 486 CG Distance: 4.899315 - Hydrophobic, 6 - L TYR 33 CE2 VS B PHE 486 CD2 Distance: 4.688573 - Hydrophobic, 7 - L TYR 33 OH VS B PHE 486 N Distance: 4.369686 - Hydrogen Bonds, 8 - L TYR 33 OH VS B PHE 486 O Distance: 3.400149 - Hydrogen Bonds, 9 - L TYR 33 OH VS B CYS 488 SG Distance: 3.573444 - Hydrogen Bonds, 10 - L TYR 92 O VS B PHE 486 N Distance: 4.397182 - Hydrogen Bonds, 11 - L TYR 92 CB VS B PHE 486 CB Distance: 4.131873 - Hydrophobic, 12 - L TYR 92 CB VS B PHE 486 CG Distance: 4.647880 - Hydrophobic, 13 - L TYR 92 CB VS B PHE 486 CD2 Distance: 4.791557 - Hydrophobic, 14 - L TYR 92 CG VS B PHE 486 CB Distance: 4.635434 - Hydrophobic, 15 - L TYR 92 CG VS B PHE 486 CG Distance: 4.696460 - Hydrophobic, 16 - L TYR 92 CG VS B PHE 486 CG Distance: 5.156369 - Aromatic Stacking, 17 - L TYR 92 CG VS B PHE 486 CD1 Distance: 5.434324 - Hydrophobic, 18 - L TYR 92 CG VS B PHE 486 CD2 Distance: 4.570272 - Hydrophobic, 19 - L TYR 92 CG VS B PHE 486 CE2 Distance: 5.208357 - Hydrophobic, 20 - L TYR 92 CD1 VS B PHE 486 CB Distance: 5.266546 - Hydrophobic, 21 - L TYR 92 CD1 VS B PHE 486 CG Distance: 5.128226 - Hydrophobic, 22 - L TYR 92 CD1 VS B PHE 486 CD2 Distance: 5.120266 - Hydrophobic, 23 - L TYR 92 CD2 VS B PHE 486 CB Distance: 4.949209 - Hydrophobic, 24 - L TYR 92 CD2 VS B PHE 486 CG Distance: 4.829656 - Hydrophobic, 25 - L TYR 92 CD2 VS B PHE 486 CD2 Distance: 4.311607 - Hydrophobic, 26 - L TYR 92 CD2 VS B PHE 486 CE2 Distance: 4.815836 - Hydrophobic, 27 - L TYR 92 CE1 VS B PHE 486 CD2 Distance: 5.408706 - Hydrophobic, 28 - L TYR 92 CE1 VS B PHE 486 CE2 Distance: 5.485816 - Hydrophobic, 29 - L TYR 92 CE2 VS B PHE 486 CG Distance: 5.369875 - Hydrophobic, 30 - L TYR 92 CE2 VS B PHE 486 CD2 Distance: 4.648470 - Hydrophobic, 31 - L TYR 92 CE2 VS B PHE 486 CE2 Distance: 4.770584 - Hydrophobic, 32 - L GLY 94 N VS B GLU 484 O Distance: 4.891339 - Hydrogen Bonds, 33 - L GLY 94 O VS B GLY 485 N Distance: 4.833942 - Hydrogen Bonds, 34 - L GLY 94 O VS B PHE 486 N Distance: 4.025997 - Hydrogen Bonds, 35 - L LEU 95 N VS B GLU 484 O Distance: 4.350794 - Hydrogen Bonds, 36 - L LEU 95 CG VS B GLU 484 CB Distance: 4.259449 - Hydrophobic, 37 - L LEU 95 CD1 VS B GLU 484 CB Distance: 4.126498 - Hydrophobic, 38 - L LEU 95 CD1 VS B GLU 484 CG Distance: 5.142662 - Hydrophobic, 39 - L LEU 95 CD2 VS B GLU 484 CB Distance: 4.115309 - Hydrophobic, 40 - L LEU 95 CD2 VS B GLU 484 CG Distance: 5.374792 - Hydrophobic, 41 - L TRP 98 CG VS B PHE 486 CG Distance: 6.885644 - Aromatic Stacking, 42 - L TRP 98 CZ2 VS B PHE 486 CB Distance: 3.851355 - Hydrophobic, 43 - L TRP 98 CZ2 VS B PHE 486 CG Distance: 4.597526 - Hydrophobic, 44 - L TRP 98 CZ2 VS B PHE 486 CD1 Distance: 4.596822 - Hydrophobic, 45 - L TRP 98 CZ3 VS B PHE 486 CB Distance: 5.104986 - Hydrophobic, 46 - L TRP 98 CZ3 VS B PHE 486 CG Distance: 5.200028 - Hydrophobic, 47 - L TRP 98 CZ3 VS B PHE 486 CD1 Distance: 4.761161 - Hydrophobic, 48 - L TRP 98 CZ3 VS B PHE 486 CE1 Distance: 5.427182 - Hydrophobic, 49 - L TRP 98 CH2 VS B PHE 486 CB Distance: 4.010886 - Hydrophobic, 50 - L TRP 98 CH2 VS B PHE 486 CG Distance: 4.310738 - Hydrophobic, 51 - L TRP 98 CH2 VS B PHE 486 CD1 Distance: 3.956300 - Hydrophobic, 52 - L TRP 98 CH2 VS B PHE 486 CD2 Distance: 5.448923 - Hydrophobic, 53 - L TRP 98 CH2 VS B PHE 486 CE1 Distance: 4.882773 - Hydrophobic,