VIRAL PROTEIN CRYO-EM STRUCTURE OF THE SARS-COV-2 SPIKE PROTEIN BOUND TO NEUTRALIZING SYBODIES (SB23) 2-UP CONFORMATION: 0 - B ARG 346 CZ VS E GLU 32 OE2 Distance: 6.857033 - Attractive, 1 - B ARG 346 NH1 VS E GLU 32 OE2 Distance: 6.499836 - Attractive, 2 - B ARG 346 NH2 VS E GLU 32 OE2 Distance: 6.541149 - Attractive, 3 - B LYS 444 NZ VS E ARG 45 NH2 Distance: 6.133835 - Repulsive, 4 - B LYS 444 CB VS E TRP 103 CG Distance: 5.445830 - Hydrophobic, 5 - B LYS 444 CB VS E TRP 103 CD2 Distance: 4.943735 - Hydrophobic, 6 - B LYS 444 CB VS E TRP 103 CE3 Distance: 5.375089 - Hydrophobic, 7 - B LYS 444 CB VS E TRP 103 CZ2 Distance: 4.327196 - Hydrophobic, 8 - B LYS 444 CB VS E TRP 103 CZ3 Distance: 5.295450 - Hydrophobic, 9 - B LYS 444 CB VS E TRP 103 CH2 Distance: 4.795772 - Hydrophobic, 10 - B LYS 444 CG VS E TRP 103 CG Distance: 4.742639 - Hydrophobic, 11 - B LYS 444 CG VS E TRP 103 CD2 Distance: 4.392115 - Hydrophobic, 12 - B LYS 444 CG VS E TRP 103 CE3 Distance: 4.731920 - Hydrophobic, 13 - B LYS 444 CG VS E TRP 103 CZ2 Distance: 4.545963 - Hydrophobic, 14 - B LYS 444 CG VS E TRP 103 CZ3 Distance: 4.939642 - Hydrophobic, 15 - B LYS 444 CG VS E TRP 103 CH2 Distance: 4.850308 - Hydrophobic, 16 - B LYS 444 CD VS E TRP 103 CB Distance: 5.268332 - Hydrophobic, 17 - B LYS 444 CD VS E TRP 103 CG Distance: 4.716137 - Hydrophobic, 18 - B LYS 444 CD VS E TRP 103 CD2 Distance: 4.825586 - Hydrophobic, 19 - B LYS 444 CD VS E TRP 103 CE3 Distance: 5.438543 - Hydrophobic, 20 - B LYS 444 CD VS E TRP 103 CZ2 Distance: 5.417725 - Hydrophobic, 21 - B LYS 444 NZ VS E GLU 105 OE1 Distance: 6.943309 - Attractive, 22 - B VAL 445 O VS E ARG 45 NE Distance: 4.235557 - Hydrogen Bonds, 23 - B VAL 445 O VS E ARG 45 NH2 Distance: 3.412906 - Hydrogen Bonds, 24 - B GLY 446 N VS E ARG 45 O Distance: 4.449297 - Hydrogen Bonds, 25 - B GLY 446 O VS E GLU 46 N Distance: 4.232440 - Hydrogen Bonds, 26 - B GLY 446 O VS E TRP 47 N Distance: 4.095315 - Hydrogen Bonds, 27 - B GLY 447 O VS E TYR 37 OH Distance: 3.838894 - Hydrogen Bonds, 28 - B GLY 447 N VS E ARG 45 O Distance: 4.841944 - Hydrogen Bonds, 29 - B ASN 448 CB VS E TRP 103 CZ2 Distance: 5.169594 - Hydrophobic, 30 - B ASN 448 CB VS E TRP 103 CH2 Distance: 5.317807 - Hydrophobic, 31 - B TYR 449 O VS E HIS 35 NE2 Distance: 4.042016 - Hydrogen Bonds, 32 - B TYR 449 N VS E TYR 37 OH Distance: 4.670450 - Hydrogen Bonds, 33 - B TYR 449 CD1 VS E TYR 37 CE2 Distance: 4.833061 - Hydrophobic, 34 - B TYR 449 CE1 VS E TYR 37 CE2 Distance: 5.333691 - Hydrophobic, 35 - B TYR 449 CB VS E TRP 47 CB Distance: 5.025755 - Hydrophobic, 36 - B TYR 449 CB VS E TRP 47 CG Distance: 4.435404 - Hydrophobic, 37 - B TYR 449 CB VS E TRP 47 CD2 Distance: 4.417244 - Hydrophobic, 38 - B TYR 449 CB VS E TRP 47 CE3 Distance: 4.945740 - Hydrophobic, 39 - B TYR 449 CB VS E TRP 47 CZ2 Distance: 5.003757 - Hydrophobic, 40 - B TYR 449 CB VS E TRP 47 CZ3 Distance: 5.421555 - Hydrophobic, 41 - B TYR 449 CB VS E TRP 47 CH2 Distance: 5.444978 - Hydrophobic, 42 - B TYR 449 CG VS E TRP 47 CB Distance: 4.244562 - Hydrophobic, 43 - B TYR 449 CG VS E TRP 47 CG Distance: 3.959668 - Hydrophobic, 44 - B TYR 449 CG VS E TRP 47 CG Distance: 4.312257 - Aromatic Stacking, 45 - B TYR 449 CG VS E TRP 47 CD2 Distance: 3.901232 - Hydrophobic, 46 - B TYR 449 CG VS E TRP 47 CE3 Distance: 4.132150 - Hydrophobic, 47 - B TYR 449 CG VS E TRP 47 CZ2 Distance: 5.028499 - Hydrophobic, 48 - B TYR 449 CG VS E TRP 47 CZ3 Distance: 4.772227 - Hydrophobic, 49 - B TYR 449 CG VS E TRP 47 CH2 Distance: 5.178369 - Hydrophobic, 50 - B TYR 449 CD1 VS E TRP 47 CB Distance: 3.687407 - Hydrophobic, 51 - B TYR 449 CD1 VS E TRP 47 CG Distance: 3.893206 - Hydrophobic, 52 - B TYR 449 CD1 VS E TRP 47 CD2 Distance: 4.237501 - Hydrophobic, 53 - B TYR 449 CD1 VS E TRP 47 CE3 Distance: 4.522495 - Hydrophobic, 54 - B TYR 449 CD1 VS E TRP 47 CZ3 Distance: 5.454379 - Hydrophobic, 55 - B TYR 449 CD2 VS E TRP 47 CB Distance: 4.651697 - Hydrophobic, 56 - B TYR 449 CD2 VS E TRP 47 CG Distance: 4.297102 - Hydrophobic, 57 - B TYR 449 CD2 VS E TRP 47 CD2 Distance: 3.802881 - Hydrophobic, 58 - B TYR 449 CD2 VS E TRP 47 CE3 Distance: 3.571480 - Hydrophobic, 59 - B TYR 449 CD2 VS E TRP 47 CZ2 Distance: 4.705690 - Hydrophobic, 60 - B TYR 449 CD2 VS E TRP 47 CZ3 Distance: 3.946774 - Hydrophobic, 61 - B TYR 449 CD2 VS E TRP 47 CH2 Distance: 4.496911 - Hydrophobic, 62 - B TYR 449 CE1 VS E TRP 47 CB Distance: 3.602441 - Hydrophobic, 63 - B TYR 449 CE1 VS E TRP 47 CG Distance: 4.184119 - Hydrophobic, 64 - B TYR 449 CE1 VS E TRP 47 CD2 Distance: 4.477003 - Hydrophobic, 65 - B TYR 449 CE1 VS E TRP 47 CE3 Distance: 4.441267 - Hydrophobic, 66 - B TYR 449 CE1 VS E TRP 47 CZ3 Distance: 5.452570 - Hydrophobic, 67 - B TYR 449 CE2 VS E TRP 47 CB Distance: 4.588450 - Hydrophobic, 68 - B TYR 449 CE2 VS E TRP 47 CG Distance: 4.564502 - Hydrophobic, 69 - B TYR 449 CE2 VS E TRP 47 CD2 Distance: 4.067020 - Hydrophobic, 70 - B TYR 449 CE2 VS E TRP 47 CE3 Distance: 3.463787 - Hydrophobic, 71 - B TYR 449 CE2 VS E TRP 47 CZ2 Distance: 5.324033 - Hydrophobic, 72 - B TYR 449 CE2 VS E TRP 47 CZ3 Distance: 3.937292 - Hydrophobic, 73 - B TYR 449 CE2 VS E TRP 47 CH2 Distance: 4.857965 - Hydrophobic, 74 - B TYR 449 O VS E TYR 52 OH Distance: 3.577598 - Hydrogen Bonds, 75 - B ASN 450 N VS E HIS 35 NE2 Distance: 4.297116 - Hydrogen Bonds, 76 - B ASN 450 OD1 VS E HIS 35 ND1 Distance: 4.105509 - Hydrogen Bonds, 77 - B ASN 450 OD1 VS E HIS 35 NE2 Distance: 2.592626 - Hydrogen Bonds, 78 - B ASN 450 ND2 VS E HIS 35 NE2 Distance: 4.490290 - Hydrogen Bonds, 79 - B ASN 450 ND2 VS E GLN 99 OE1 Distance: 2.468523 - Hydrogen Bonds, 80 - B LEU 452 CB VS E TYR 52 CE2 Distance: 5.098671 - Hydrophobic, 81 - B LEU 452 CG VS E TYR 52 CD2 Distance: 4.577110 - Hydrophobic, 82 - B LEU 452 CG VS E TYR 52 CE1 Distance: 5.183979 - Hydrophobic, 83 - B LEU 452 CG VS E TYR 52 CE2 Distance: 3.720826 - Hydrophobic, 84 - B LEU 452 CD1 VS E TYR 52 CD2 Distance: 5.168680 - Hydrophobic, 85 - B LEU 452 CD1 VS E TYR 52 CE2 Distance: 4.086401 - Hydrophobic, 86 - B LEU 452 CD2 VS E TYR 52 CG Distance: 5.264588 - Hydrophobic, 87 - B LEU 452 CD2 VS E TYR 52 CD1 Distance: 5.157579 - Hydrophobic, 88 - B LEU 452 CD2 VS E TYR 52 CD2 Distance: 4.561663 - Hydrophobic, 89 - B LEU 452 CD2 VS E TYR 52 CE1 Distance: 4.360213 - Hydrophobic, 90 - B LEU 452 CD2 VS E TYR 52 CE2 Distance: 3.629107 - Hydrophobic, 91 - B LEU 452 CG VS E LEU 59 CD2 Distance: 4.892914 - Hydrophobic, 92 - B LEU 452 CD1 VS E LEU 59 CG Distance: 4.997898 - Hydrophobic, 93 - B LEU 452 CD1 VS E LEU 59 CD1 Distance: 5.006392 - Hydrophobic, 94 - B LEU 452 CD1 VS E LEU 59 CD2 Distance: 3.744348 - Hydrophobic, 95 - B LEU 452 CD2 VS E LEU 59 CD2 Distance: 5.396520 - Hydrophobic, 96 - B THR 470 O VS E TRP 57 NE1 Distance: 4.799942 - Hydrogen Bonds, 97 - B THR 470 OG1 VS E TRP 57 NE1 Distance: 4.142121 - Hydrogen Bonds, 98 - B THR 470 CG2 VS E TRP 57 CE3 Distance: 5.236189 - Hydrophobic, 99 - B THR 470 CG2 VS E TRP 57 CZ2 Distance: 4.907369 - Hydrophobic, 100 - B THR 470 CG2 VS E TRP 57 CZ3 Distance: 4.559906 - Hydrophobic, 101 - B THR 470 CG2 VS E TRP 57 CH2 Distance: 4.381709 - Hydrophobic, 102 - B GLU 484 OE2 VS E LYS 65 NZ Distance: 5.875033 - Attractive, 103 - B PHE 490 CG VS E TRP 57 CG Distance: 6.877107 - Aromatic Stacking, 104 - B PHE 490 CE1 VS E TRP 57 CB Distance: 4.652355 - Hydrophobic, 105 - B PHE 490 CE1 VS E TRP 57 CG Distance: 5.085848 - Hydrophobic, 106 - B PHE 490 CE2 VS E TRP 57 CB Distance: 4.802087 - Hydrophobic, 107 - B PHE 490 CE2 VS E TRP 57 CG Distance: 5.356198 - Hydrophobic, 108 - B PHE 490 CZ VS E TRP 57 CB Distance: 3.884632 - Hydrophobic, 109 - B PHE 490 CZ VS E TRP 57 CG Distance: 4.427582 - Hydrophobic, 110 - B PHE 490 CZ VS E TRP 57 CD2 Distance: 5.329987 - Hydrophobic, 111 - B PHE 490 CG VS E LEU 59 CG Distance: 5.092654 - Hydrophobic, 112 - B PHE 490 CG VS E LEU 59 CD1 Distance: 5.029595 - Hydrophobic, 113 - B PHE 490 CD1 VS E LEU 59 CG Distance: 5.497000 - Hydrophobic, 114 - B PHE 490 CD1 VS E LEU 59 CD1 Distance: 5.214235 - Hydrophobic, 115 - B PHE 490 CD2 VS E LEU 59 CG Distance: 4.431146 - Hydrophobic, 116 - B PHE 490 CD2 VS E LEU 59 CD1 Distance: 4.230676 - Hydrophobic, 117 - B PHE 490 CD2 VS E LEU 59 CD2 Distance: 4.856546 - Hydrophobic, 118 - B PHE 490 CE1 VS E LEU 59 CG Distance: 5.322304 - Hydrophobic, 119 - B PHE 490 CE1 VS E LEU 59 CD1 Distance: 4.678744 - Hydrophobic, 120 - B PHE 490 CE2 VS E LEU 59 CG Distance: 4.211137 - Hydrophobic, 121 - B PHE 490 CE2 VS E LEU 59 CD1 Distance: 3.548643 - Hydrophobic, 122 - B PHE 490 CE2 VS E LEU 59 CD2 Distance: 4.763882 - Hydrophobic, 123 - B PHE 490 CZ VS E LEU 59 CG Distance: 4.699078 - Hydrophobic, 124 - B PHE 490 CZ VS E LEU 59 CD1 Distance: 3.819514 - Hydrophobic, 125 - B LEU 492 CD1 VS E TYR 52 CD2 Distance: 5.488460 - Hydrophobic, 126 - B LEU 492 CD1 VS E TRP 57 CD2 Distance: 5.419547 - Hydrophobic, 127 - B LEU 492 CD1 VS E TRP 57 CE3 Distance: 4.914195 - Hydrophobic, 128 - B LEU 492 CD1 VS E TRP 57 CZ3 Distance: 5.292366 - Hydrophobic, 129 - B LEU 492 CB VS E LEU 59 CD1 Distance: 5.357454 - Hydrophobic, 130 - B LEU 492 CB VS E LEU 59 CD2 Distance: 5.212387 - Hydrophobic,