VIRAL PROTEIN, IMMUNE SYSTEM
EM STRUCTURE OF SARS-COV-2 SPIKE GLYCOPROTEIN (ALL RBD DOWN) IN COMPLEX WITH COVOX-159:

0 - C GLN 14 OE1  VS D THR 28 N   
Distance: 4.369736 - Hydrogen Bonds, 
1 - C GLN 14 N    VS D TYR 32 OH  
Distance: 4.881509 - Hydrogen Bonds, 
2 - C GLN 14 CB   VS D TYR 32 CD1 
Distance: 5.359072 - Hydrophobic, 
3 - C GLN 14 CB   VS D TYR 32 CE1 
Distance: 4.430496 - Hydrophobic, 
4 - C GLN 14 CB   VS D TYR 32 CE2 
Distance: 4.597527 - Hydrophobic, 
5 - C GLN 14 CG   VS D TYR 32 CE1 
Distance: 4.883492 - Hydrophobic, 
6 - C GLN 14 OE1  VS D TYR 32 OH  
Distance: 2.853025 - Hydrogen Bonds, 
7 - C GLN 14 NE2  VS D TYR 32 OH  
Distance: 4.795765 - Hydrogen Bonds, 
8 - C TYR 144 CG   VS D TYR 53 CG  
Distance: 5.405236 - Aromatic Stacking, 
9 - C TYR 144 CG   VS D TYR 53 CE1 
Distance: 5.483883 - Hydrophobic, 
10 - C TYR 144 CG   VS D TYR 53 CE2 
Distance: 5.324681 - Hydrophobic, 
11 - C TYR 144 CD1  VS D TYR 53 CE1 
Distance: 5.257772 - Hydrophobic, 
12 - C TYR 144 CD1  VS D TYR 53 CE2 
Distance: 4.811017 - Hydrophobic, 
13 - C TYR 144 CD2  VS D TYR 53 CE2 
Distance: 5.259260 - Hydrophobic, 
14 - C TYR 144 CE1  VS D TYR 53 CE1 
Distance: 5.270255 - Hydrophobic, 
15 - C TYR 144 CE1  VS D TYR 53 CE2 
Distance: 4.198110 - Hydrophobic, 
16 - C TYR 144 CE2  VS D TYR 53 CE2 
Distance: 4.700951 - Hydrophobic, 
17 - C TYR 144 OH   VS D TYR 53 OH  
Distance: 4.314773 - Hydrogen Bonds, 
18 - C TYR 145 O    VS D TYR 53 OH  
Distance: 3.834096 - Hydrogen Bonds, 
19 - C HIS 146 CG   VS D TYR 53 CG  
Distance: 6.794605 - Aromatic Stacking, 
20 - C HIS 146 N    VS D ASP 54 OD2 
Distance: 4.887407 - Hydrogen Bonds, 
21 - C HIS 146 CB   VS D ASP 54 CB  
Distance: 5.405600 - Hydrophobic, 
22 - C HIS 146 ND1  VS D ASP 54 OD1 
Distance: 6.239360 - Attractive, 
23 - C HIS 146 ND1  VS D ASP 54 OD2 
Distance: 4.829492 - Attractive, Hydrogen Bonds, 
24 - C HIS 146 NE2  VS D ASP 54 O   
Distance: 4.378510 - Hydrogen Bonds, 
25 - C HIS 146 NE2  VS D ASP 54 OD1 
Distance: 5.546643 - Attractive, 
26 - C HIS 146 NE2  VS D ASP 54 OD2 
Distance: 4.481726 - Attractive, Hydrogen Bonds, 
27 - C LYS 147 NZ   VS D GLY 56 O   
Distance: 3.609295 - Hydrogen Bonds, 
28 - C LYS 147 NZ   VS D ASN 57 OD1 
Distance: 2.420451 - Hydrogen Bonds, 
29 - C GLY 252 N    VS D TYR 108 OH  
Distance: 4.545251 - Hydrogen Bonds, 
30 - C GLY 252 O    VS D TYR 108 OH  
Distance: 4.653410 - Hydrogen Bonds, 
31 - C ASP 253 N    VS D TYR 108 OH  
Distance: 2.762155 - Hydrogen Bonds, 
32 - C ASP 253 O    VS D TYR 108 OH  
Distance: 4.596317 - Hydrogen Bonds, 
33 - C ASP 253 CB   VS D TYR 108 CE1 
Distance: 5.055351 - Hydrophobic, 
34 - C ASP 253 CB   VS D TYR 108 CE2 
Distance: 5.136340 - Hydrophobic, 
35 - C ASP 253 OD2  VS D TYR 108 OH  
Distance: 4.285750 - Hydrogen Bonds,