VIRAL PROTEIN, IMMUNE SYSTEM
STRUCTURE OF SARS-COV-2 S PROTEIN IN COMPLEX WITH N-TERMINAL DOMAIN ANTIBODY DH1052:

0 - C PHE 32 CG   VS L TYR 52 CG  
Distance: 5.682867 - Aromatic Stacking, 
1 - C PHE 32 CE1  VS L TYR 52 CD1 
Distance: 5.044762 - Hydrophobic, 
2 - C PHE 32 CE1  VS L TYR 52 CE1 
Distance: 4.578731 - Hydrophobic, 
3 - C PHE 32 CE1  VS L TYR 52 CE2 
Distance: 5.447821 - Hydrophobic, 
4 - C PHE 32 CE2  VS L TYR 52 CE1 
Distance: 4.932497 - Hydrophobic, 
5 - C PHE 32 CZ   VS L TYR 52 CD1 
Distance: 4.882482 - Hydrophobic, 
6 - C PHE 32 CZ   VS L TYR 52 CE1 
Distance: 4.076015 - Hydrophobic, 
7 - C PHE 32 CZ   VS L TYR 52 CE2 
Distance: 5.191289 - Hydrophobic, 
8 - C ASN 211 N    VS L SER 113 O   
Distance: 4.850448 - Hydrogen Bonds, 
9 - C ASN 211 ND2  VS L SER 113 O   
Distance: 4.223416 - Hydrogen Bonds, 
10 - C ASN 211 OD1  VS L SER 114 N   
Distance: 4.136065 - Hydrogen Bonds, 
11 - C ASN 211 CB   VS L PRO 115 CB  
Distance: 4.994194 - Hydrophobic, 
12 - C ASN 211 CB   VS L PRO 115 CG  
Distance: 4.457050 - Hydrophobic, 
13 - C LEU 212 CD1  VS L TYR 111 CE1 
Distance: 5.486917 - Hydrophobic, 
14 - C LEU 212 CD1  VS L TYR 111 CE2 
Distance: 4.435808 - Hydrophobic, 
15 - C LEU 212 CG   VS L PRO 115 CB  
Distance: 4.901018 - Hydrophobic, 
16 - C LEU 212 CG   VS L PRO 115 CG  
Distance: 5.443298 - Hydrophobic, 
17 - C LEU 212 CD1  VS L PRO 115 CB  
Distance: 4.635026 - Hydrophobic, 
18 - C LEU 212 CD2  VS L PRO 115 CB  
Distance: 5.233294 - Hydrophobic, 
19 - C LEU 212 CD1  VS L TRP 117 CZ2 
Distance: 4.223205 - Hydrophobic, 
20 - C LEU 212 CD1  VS L TRP 117 CH2 
Distance: 5.324690 - Hydrophobic, 
21 - C LEU 216 O    VS L TYR 52 OH  
Distance: 2.996926 - Hydrogen Bonds, 
22 - C PRO 217 O    VS L TYR 52 OH  
Distance: 4.751171 - Hydrogen Bonds, 
23 - C PRO 217 CB   VS L TYR 52 CE2 
Distance: 5.444442 - Hydrophobic, 
24 - C GLN 218 O    VS L SER 49 OG  
Distance: 4.881363 - Hydrogen Bonds, 
25 - C GLN 218 OE1  VS L SER 49 OG  
Distance: 2.773361 - Hydrogen Bonds, 
26 - C GLN 218 NE2  VS L SER 49 OG  
Distance: 3.547592 - Hydrogen Bonds, 
27 - C GLN 218 OE1  VS L SER 50 N   
Distance: 3.904657 - Hydrogen Bonds, 
28 - C GLN 218 OE1  VS L SER 50 OG  
Distance: 3.944029 - Hydrogen Bonds, 
29 - C GLN 218 NE2  VS L SER 50 OG  
Distance: 3.038246 - Hydrogen Bonds, 
30 - C GLN 218 OE1  VS L SER 51 N   
Distance: 3.177050 - Hydrogen Bonds, 
31 - C GLN 218 OE1  VS L SER 51 OG  
Distance: 2.719548 - Hydrogen Bonds, 
32 - C GLN 218 NE2  VS L SER 51 OG  
Distance: 3.907500 - Hydrogen Bonds, 
33 - C GLN 218 N    VS L TYR 52 OH  
Distance: 3.078444 - Hydrogen Bonds, 
34 - C GLN 218 CB   VS L TYR 52 CG  
Distance: 4.788777 - Hydrophobic, 
35 - C GLN 218 CB   VS L TYR 52 CD1 
Distance: 5.082521 - Hydrophobic, 
36 - C GLN 218 CB   VS L TYR 52 CD2 
Distance: 4.073628 - Hydrophobic, 
37 - C GLN 218 CB   VS L TYR 52 CE1 
Distance: 4.722352 - Hydrophobic, 
38 - C GLN 218 CB   VS L TYR 52 CE2 
Distance: 3.616695 - Hydrophobic, 
39 - C GLN 218 CG   VS L TYR 52 CD2 
Distance: 5.101671 - Hydrophobic, 
40 - C GLN 218 CG   VS L TYR 52 CE2 
Distance: 4.949845 - Hydrophobic, 
41 - C GLN 218 OE1  VS L TYR 52 N   
Distance: 3.688467 - Hydrogen Bonds, 
42 - C SER 605 OG   VS L SER 87 OG  
Distance: 2.823462 - Hydrogen Bonds, 
43 - C ASN 606 N    VS L SER 87 OG  
Distance: 3.108016 - Hydrogen Bonds, 
44 - C ASN 606 O    VS L SER 87 OG  
Distance: 4.645792 - Hydrogen Bonds, 
45 - C GLN 607 N    VS L SER 87 OG  
Distance: 4.736619 - Hydrogen Bonds, 
46 - C GLU 654 OE1  VS L ARG 37 NH2 
Distance: 6.877030 - Attractive, 
47 - C GLU 654 OE2  VS L ARG 37 NH2 
Distance: 6.876007 - Attractive,