VIRAL PROTEIN, IMMUNE SYSTEM
STRUCTURE OF SARS-COV-2 S PROTEIN IN COMPLEX WITH RECEPTOR BINDING DOMAIN ANTIBODY DH1041:

0 - A GLY 447 O    VS H LYS 58 NZ  
Distance: 4.500733 - Hydrogen Bonds, 
1 - A TYR 449 O    VS H ARG 97 NE  
Distance: 4.795967 - Hydrogen Bonds, 
2 - A TYR 449 O    VS H ARG 97 NH1 
Distance: 3.347660 - Hydrogen Bonds, 
3 - A TYR 449 O    VS H ARG 97 NH2 
Distance: 2.790277 - Hydrogen Bonds, 
4 - A ASN 450 O    VS H ARG 97 NH2 
Distance: 4.830262 - Hydrogen Bonds, 
5 - A LEU 452 CG   VS H ASP 99 CB  
Distance: 4.469300 - Hydrophobic, 
6 - A LEU 452 CD1  VS H ASP 99 CB  
Distance: 4.043006 - Hydrophobic, 
7 - A LEU 452 CD2  VS H ASP 99 CB  
Distance: 3.731754 - Hydrophobic, 
8 - A GLU 484 OE1  VS H ARG 94 NE  
Distance: 4.918529 - Attractive, 
9 - A GLU 484 OE1  VS H ARG 94 CZ  
Distance: 3.666340 - Attractive, 
10 - A GLU 484 OE1  VS H ARG 94 NH1 
Distance: 2.813370 - Attractive, Hydrogen Bonds, 
11 - A GLU 484 OE1  VS H ARG 94 NH2 
Distance: 3.596864 - Attractive, Hydrogen Bonds, 
12 - A GLU 484 OE2  VS H ARG 94 NE  
Distance: 4.557330 - Attractive, Hydrogen Bonds, 
13 - A GLU 484 OE2  VS H ARG 94 CZ  
Distance: 3.376525 - Attractive, 
14 - A GLU 484 OE2  VS H ARG 94 NH1 
Distance: 3.286160 - Attractive, Hydrogen Bonds, 
15 - A GLU 484 OE2  VS H ARG 94 NH2 
Distance: 2.715839 - Attractive, Hydrogen Bonds, 
16 - A GLU 484 O    VS H ARG 96 NH2 
Distance: 4.343854 - Hydrogen Bonds, 
17 - A GLU 484 CG   VS H ARG 96 CG  
Distance: 4.364062 - Hydrophobic, 
18 - A GLU 484 OE1  VS H ARG 96 NE  
Distance: 4.051629 - Attractive, Hydrogen Bonds, 
19 - A GLU 484 OE1  VS H ARG 96 CZ  
Distance: 4.796167 - Attractive, 
20 - A GLU 484 OE1  VS H ARG 96 NH1 
Distance: 5.946289 - Attractive, 
21 - A GLU 484 OE1  VS H ARG 96 NH2 
Distance: 4.700042 - Attractive, Hydrogen Bonds, 
22 - A GLU 484 OE2  VS H ARG 96 NE  
Distance: 2.775357 - Attractive, Hydrogen Bonds, 
23 - A GLU 484 OE2  VS H ARG 96 CZ  
Distance: 3.152717 - Attractive, 
24 - A GLU 484 OE2  VS H ARG 96 NH1 
Distance: 4.410352 - Attractive, Hydrogen Bonds, 
25 - A GLU 484 OE2  VS H ARG 96 NH2 
Distance: 2.733899 - Attractive, Hydrogen Bonds, 
26 - A GLU 484 OE1  VS H ASP 101 OD1 
Distance: 6.073740 - Repulsive, 
27 - A GLU 484 OE1  VS H ASP 101 OD2 
Distance: 6.131431 - Repulsive, 
28 - A GLU 484 OE2  VS H ASP 101 OD1 
Distance: 4.505385 - Repulsive, 
29 - A GLU 484 OE2  VS H ASP 101 OD2 
Distance: 4.731170 - Repulsive, 
30 - A GLY 485 N    VS H SER 31 OG  
Distance: 4.656889 - Hydrogen Bonds, 
31 - A GLY 485 O    VS H SER 31 OG  
Distance: 4.590953 - Hydrogen Bonds, 
32 - A PHE 486 N    VS H SER 31 O   
Distance: 4.880885 - Hydrogen Bonds, 
33 - A PHE 486 N    VS H SER 31 OG  
Distance: 2.863822 - Hydrogen Bonds, 
34 - A PHE 490 CE2  VS H ASN 100 CB  
Distance: 5.077367 - Hydrophobic, 
35 - A PHE 490 CZ   VS H ASN 100 CB  
Distance: 4.888471 - Hydrophobic, 
36 - A LEU 492 O    VS H ARG 52 NH1 
Distance: 3.930370 - Hydrogen Bonds, 
37 - A LEU 492 O    VS H ARG 52 NH2 
Distance: 3.156937 - Hydrogen Bonds, 
38 - A GLN 493 NE2  VS H GLN 53 OE1 
Distance: 4.126011 - Hydrogen Bonds, 
39 - A GLN 493 CG   VS H ASP 54 CB  
Distance: 4.859806 - Hydrophobic, 
40 - A GLN 493 NE2  VS H ASP 54 OD1 
Distance: 4.702442 - Hydrogen Bonds, 
41 - A GLN 493 NE2  VS H ASP 54 OD2 
Distance: 2.810418 - Hydrogen Bonds, 
42 - A SER 494 N    VS H ASP 54 OD1 
Distance: 4.698869 - Hydrogen Bonds, 
43 - A SER 494 N    VS H ASP 54 OD2 
Distance: 4.664650 - Hydrogen Bonds, 
44 - A SER 494 OG   VS H ASP 54 OD1 
Distance: 3.656360 - Hydrogen Bonds, 
45 - A SER 494 OG   VS H SER 56 OG  
Distance: 2.871096 - Hydrogen Bonds, 
46 - A SER 494 OG   VS H ARG 97 NH2 
Distance: 4.432565 - Hydrogen Bonds,