VIRAL PROTEIN/IMMUNE SYSTEM
STRUCTURE OF THE SARS-COV-2 S 2P TRIMER IN COMPLEX WITH THE HUMAN NEUTRALIZING ANTIBODY FAB FRAGMENT, C121 (STATE 1):

0 - C GLY 404 O    VS F SER 65 OG  
Distance: 2.614752 - Hydrogen Bonds, 
1 - C GLY 404 O    VS F LYS 66 N   
Distance: 4.687405 - Hydrogen Bonds, 
2 - C GLY 404 O    VS F SER 67 OG  
Distance: 4.025079 - Hydrogen Bonds, 
3 - C ASP 405 N    VS F SER 65 OG  
Distance: 3.715595 - Hydrogen Bonds, 
4 - C ASP 405 O    VS F SER 65 OG  
Distance: 3.531822 - Hydrogen Bonds, 
5 - C ASP 405 OD1  VS F SER 65 OG  
Distance: 4.481304 - Hydrogen Bonds, 
6 - C ASP 405 OD1  VS F SER 72 OG  
Distance: 4.248806 - Hydrogen Bonds, 
7 - C GLU 406 N    VS F SER 65 OG  
Distance: 3.681444 - Hydrogen Bonds, 
8 - C VAL 407 N    VS F SER 65 OG  
Distance: 4.000407 - Hydrogen Bonds, 
9 - C ARG 408 NH1  VS F VAL 33 O   
Distance: 4.566872 - Hydrogen Bonds, 
10 - C ARG 408 NE   VS F GLY 51 O   
Distance: 4.031769 - Hydrogen Bonds, 
11 - C ARG 408 NH1  VS F GLY 51 O   
Distance: 2.091672 - Hydrogen Bonds, 
12 - C ARG 408 NH2  VS F GLY 51 O   
Distance: 4.216665 - Hydrogen Bonds, 
13 - C ARG 408 NE   VS F SER 52 OG  
Distance: 4.285796 - Hydrogen Bonds, 
14 - C ARG 408 NH1  VS F SER 52 OG  
Distance: 3.330673 - Hydrogen Bonds, 
15 - C ARG 408 NE   VS F GLY 64 O   
Distance: 4.630149 - Hydrogen Bonds, 
16 - C ARG 408 NH1  VS F GLY 64 O   
Distance: 4.114001 - Hydrogen Bonds, 
17 - C ARG 408 N    VS F SER 65 OG  
Distance: 4.884349 - Hydrogen Bonds, 
18 - C ARG 408 NE   VS F SER 65 O   
Distance: 3.358291 - Hydrogen Bonds, 
19 - C ARG 408 NH1  VS F SER 65 O   
Distance: 3.873221 - Hydrogen Bonds, 
20 - C ARG 408 NH2  VS F SER 65 O   
Distance: 2.270875 - Hydrogen Bonds, 
21 - C ARG 408 CB   VS F LYS 66 CB  
Distance: 5.171707 - Hydrophobic, 
22 - C ARG 408 CG   VS F LYS 66 CB  
Distance: 3.808031 - Hydrophobic, 
23 - C ARG 408 CG   VS F LYS 66 CG  
Distance: 4.846565 - Hydrophobic, 
24 - C ARG 408 CG   VS F LYS 66 CD  
Distance: 4.980472 - Hydrophobic, 
25 - C ARG 408 NE   VS F LYS 66 NZ  
Distance: 6.673911 - Repulsive, 
26 - C ARG 408 NH1  VS F SER 72 O   
Distance: 4.665766 - Hydrogen Bonds, 
27 - C ARG 408 NH2  VS F SER 72 O   
Distance: 4.260683 - Hydrogen Bonds, 
28 - C GLN 409 NE2  VS F SER 63 OG  
Distance: 4.057749 - Hydrogen Bonds, 
29 - C GLN 409 NE2  VS F GLY 64 O   
Distance: 4.693087 - Hydrogen Bonds, 
30 - C GLN 414 OE1  VS F SER 52 OG  
Distance: 4.822221 - Hydrogen Bonds, 
31 - C GLN 414 OE1  VS F LYS 53 N   
Distance: 4.623500 - Hydrogen Bonds, 
32 - C THR 415 OG1  VS F ARG 54 NH1 
Distance: 4.678462 - Hydrogen Bonds, 
33 - C THR 415 CG2  VS F ASN 60 CB  
Distance: 4.692004 - Hydrophobic, 
34 - C ASP 420 OD2  VS F ARG 54 NH1 
Distance: 6.884301 - Attractive, 
35 - C VAL 503 O    VS F SER 67 OG  
Distance: 4.336019 - Hydrogen Bonds, 
36 - C VAL 503 CG1  VS F THR 70 CG2 
Distance: 5.325990 - Hydrophobic, 
37 - C GLY 504 N    VS F SER 67 OG  
Distance: 4.039479 - Hydrogen Bonds, 
38 - C GLY 504 O    VS F SER 67 OG  
Distance: 4.472659 - Hydrogen Bonds, 
39 - C TYR 505 CE1  VS F THR 20 CG2 
Distance: 5.081585 - Hydrophobic, 
40 - C TYR 508 OH   VS F GLY 68 N   
Distance: 4.470476 - Hydrogen Bonds,