VIRAL PROTEIN/IMMUNE SYSTEM SARS-COV-2 SPIKE IN COMPLEX WITH THE S2M11 NEUTRALIZING ANTIBODY FAB FRAGMENT: 0 - A GLY 446 O VS H THR 77 OG1 Distance: 4.672289 - Hydrogen Bonds, 1 - A TYR 449 OH VS H TYR 27 O Distance: 3.611555 - Hydrogen Bonds, 2 - A TYR 449 CD1 VS H THR 28 CG2 Distance: 4.647154 - Hydrophobic, 3 - A TYR 449 CE1 VS H THR 28 CG2 Distance: 3.913742 - Hydrophobic, 4 - A TYR 449 OH VS H THR 28 N Distance: 4.692341 - Hydrogen Bonds, 5 - A TYR 449 CG VS H PHE 29 CB Distance: 5.408512 - Hydrophobic, 6 - A TYR 449 CG VS H PHE 29 CG Distance: 6.500389 - Aromatic Stacking, 7 - A TYR 449 CD1 VS H PHE 29 CB Distance: 4.941013 - Hydrophobic, 8 - A TYR 449 CD2 VS H PHE 29 CB Distance: 5.148131 - Hydrophobic, 9 - A TYR 449 CE1 VS H PHE 29 CB Distance: 4.113575 - Hydrophobic, 10 - A TYR 449 CE1 VS H PHE 29 CG Distance: 5.298064 - Hydrophobic, 11 - A TYR 449 CE1 VS H PHE 29 CD2 Distance: 5.444105 - Hydrophobic, 12 - A TYR 449 CE2 VS H PHE 29 CB Distance: 4.366561 - Hydrophobic, 13 - A TYR 449 CE2 VS H PHE 29 CG Distance: 5.284667 - Hydrophobic, 14 - A TYR 449 CE2 VS H PHE 29 CD2 Distance: 5.288267 - Hydrophobic, 15 - A TYR 449 OH VS H PHE 29 N Distance: 3.080107 - Hydrogen Bonds, 16 - A TYR 449 CB VS H THR 30 CG2 Distance: 4.523019 - Hydrophobic, 17 - A TYR 449 CG VS H THR 30 CG2 Distance: 4.231775 - Hydrophobic, 18 - A TYR 449 CD1 VS H THR 30 CG2 Distance: 3.688272 - Hydrophobic, 19 - A TYR 449 CD2 VS H THR 30 CG2 Distance: 5.079296 - Hydrophobic, 20 - A TYR 449 CE1 VS H THR 30 CG2 Distance: 4.154380 - Hydrophobic, 21 - A TYR 449 CE2 VS H THR 30 CG2 Distance: 5.426473 - Hydrophobic, 22 - A TYR 449 CB VS H THR 74 CG2 Distance: 4.986922 - Hydrophobic, 23 - A TYR 449 CG VS H THR 74 CG2 Distance: 5.151779 - Hydrophobic, 24 - A TYR 449 CD2 VS H THR 74 CG2 Distance: 5.409890 - Hydrophobic, 25 - A TYR 449 CG VS H THR 77 CG2 Distance: 5.386230 - Hydrophobic, 26 - A TYR 449 CD2 VS H THR 77 CG2 Distance: 4.295799 - Hydrophobic, 27 - A TYR 449 CE1 VS H THR 77 CG2 Distance: 5.091371 - Hydrophobic, 28 - A TYR 449 CE2 VS H THR 77 CG2 Distance: 3.422889 - Hydrophobic, 29 - A LEU 452 CG VS H ILE 54 CD1 Distance: 4.902087 - Hydrophobic, 30 - A LEU 452 CD1 VS H ILE 54 CD1 Distance: 5.078114 - Hydrophobic, 31 - A LEU 452 CD2 VS H ILE 54 CG1 Distance: 4.613894 - Hydrophobic, 32 - A LEU 452 CD2 VS H ILE 54 CD1 Distance: 3.593956 - Hydrophobic, 33 - A LEU 455 CG VS H TYR 103 CE1 Distance: 5.485874 - Hydrophobic, 34 - A LEU 455 CG VS H TYR 103 CE2 Distance: 5.319595 - Hydrophobic, 35 - A LEU 455 CD2 VS H TYR 103 CG Distance: 4.864567 - Hydrophobic, 36 - A LEU 455 CD2 VS H TYR 103 CD1 Distance: 4.662170 - Hydrophobic, 37 - A LEU 455 CD2 VS H TYR 103 CD2 Distance: 4.592853 - Hydrophobic, 38 - A LEU 455 CD2 VS H TYR 103 CE1 Distance: 4.140656 - Hydrophobic, 39 - A LEU 455 CD2 VS H TYR 103 CE2 Distance: 4.081228 - Hydrophobic, 40 - A PHE 456 CG VS H TYR 103 CG Distance: 5.255102 - Aromatic Stacking, 41 - A PHE 456 CD2 VS H TYR 103 CB Distance: 5.296852 - Hydrophobic, 42 - A PHE 456 CD2 VS H TYR 103 CG Distance: 5.215955 - Hydrophobic, 43 - A PHE 456 CD2 VS H TYR 103 CD1 Distance: 4.928394 - Hydrophobic, 44 - A PHE 456 CD2 VS H TYR 103 CE1 Distance: 5.378598 - Hydrophobic, 45 - A PHE 456 CE1 VS H TYR 103 CB Distance: 4.390888 - Hydrophobic, 46 - A PHE 456 CE1 VS H TYR 103 CG Distance: 4.721299 - Hydrophobic, 47 - A PHE 456 CE1 VS H TYR 103 CD1 Distance: 5.168929 - Hydrophobic, 48 - A PHE 456 CE1 VS H TYR 103 CD2 Distance: 5.121468 - Hydrophobic, 49 - A PHE 456 CE2 VS H TYR 103 CB Distance: 4.099760 - Hydrophobic, 50 - A PHE 456 CE2 VS H TYR 103 CG Distance: 3.904753 - Hydrophobic, 51 - A PHE 456 CE2 VS H TYR 103 CD1 Distance: 3.718275 - Hydrophobic, 52 - A PHE 456 CE2 VS H TYR 103 CD2 Distance: 4.565349 - Hydrophobic, 53 - A PHE 456 CE2 VS H TYR 103 CE1 Distance: 4.229233 - Hydrophobic, 54 - A PHE 456 CE2 VS H TYR 103 CE2 Distance: 4.992812 - Hydrophobic, 55 - A PHE 456 CZ VS H TYR 103 CB Distance: 3.527182 - Hydrophobic, 56 - A PHE 456 CZ VS H TYR 103 CG Distance: 3.577166 - Hydrophobic, 57 - A PHE 456 CZ VS H TYR 103 CD1 Distance: 3.880201 - Hydrophobic, 58 - A PHE 456 CZ VS H TYR 103 CD2 Distance: 4.060952 - Hydrophobic, 59 - A PHE 456 CZ VS H TYR 103 CE1 Distance: 4.568714 - Hydrophobic, 60 - A PHE 456 CZ VS H TYR 103 CE2 Distance: 4.725205 - Hydrophobic, 61 - A GLU 484 OE1 VS H TYR 33 OH Distance: 4.037088 - Hydrogen Bonds, 62 - A GLU 484 CB VS H TRP 50 CZ2 Distance: 4.930127 - Hydrophobic, 63 - A GLU 484 CB VS H TRP 50 CZ3 Distance: 4.862754 - Hydrophobic, 64 - A GLU 484 CB VS H TRP 50 CH2 Distance: 4.087519 - Hydrophobic, 65 - A GLU 484 CG VS H TRP 50 CH2 Distance: 5.092147 - Hydrophobic, 66 - A GLU 484 OE1 VS H ASN 52 ND2 Distance: 2.859948 - Hydrogen Bonds, 67 - A GLU 484 OE2 VS H ASN 52 ND2 Distance: 3.996091 - Hydrogen Bonds, 68 - A GLU 484 OE1 VS H SER 55 OG Distance: 3.696075 - Hydrogen Bonds, 69 - A GLU 484 OE2 VS H SER 55 OG Distance: 2.716940 - Hydrogen Bonds, 70 - A GLU 484 OE2 VS H GLY 57 N Distance: 3.987807 - Hydrogen Bonds, 71 - A PHE 486 CB VS H PHE 102 CB Distance: 5.414665 - Hydrophobic, 72 - A PHE 486 CB VS H PHE 102 CG Distance: 4.817698 - Hydrophobic, 73 - A PHE 486 CB VS H PHE 102 CD1 Distance: 5.254217 - Hydrophobic, 74 - A PHE 486 CB VS H PHE 102 CD2 Distance: 4.311991 - Hydrophobic, 75 - A PHE 486 CB VS H PHE 102 CE1 Distance: 5.234700 - Hydrophobic, 76 - A PHE 486 CB VS H PHE 102 CE2 Distance: 4.291094 - Hydrophobic, 77 - A PHE 486 CB VS H PHE 102 CZ Distance: 4.769416 - Hydrophobic, 78 - A PHE 486 CG VS H PHE 102 CG Distance: 5.315504 - Hydrophobic, 79 - A PHE 486 CG VS H PHE 102 CG Distance: 6.119916 - Aromatic Stacking, 80 - A PHE 486 CG VS H PHE 102 CD2 Distance: 4.609395 - Hydrophobic, 81 - A PHE 486 CG VS H PHE 102 CE2 Distance: 4.742820 - Hydrophobic, 82 - A PHE 486 CD1 VS H PHE 102 CB Distance: 5.277856 - Hydrophobic, 83 - A PHE 486 CD1 VS H PHE 102 CG Distance: 4.880658 - Hydrophobic, 84 - A PHE 486 CD1 VS H PHE 102 CD2 Distance: 3.949259 - Hydrophobic, 85 - A PHE 486 CD1 VS H PHE 102 CE2 Distance: 4.150408 - Hydrophobic, 86 - A PHE 486 CD1 VS H PHE 102 CZ Distance: 5.201318 - Hydrophobic, 87 - A PHE 486 CE1 VS H PHE 102 CD2 Distance: 4.859815 - Hydrophobic, 88 - A PHE 486 CE1 VS H PHE 102 CE2 Distance: 5.157128 - Hydrophobic, 89 - A PHE 486 CG VS H TYR 109 CG Distance: 6.121753 - Aromatic Stacking, 90 - A PHE 486 CD1 VS H TYR 109 CD1 Distance: 5.186120 - Hydrophobic, 91 - A PHE 486 CD1 VS H TYR 109 CE1 Distance: 4.404661 - Hydrophobic, 92 - A PHE 486 CD1 VS H TYR 109 CE2 Distance: 5.304310 - Hydrophobic, 93 - A PHE 486 CE1 VS H TYR 109 CD1 Distance: 5.287055 - Hydrophobic, 94 - A PHE 486 CE1 VS H TYR 109 CE1 Distance: 4.227421 - Hydrophobic, 95 - A PHE 486 CE1 VS H TYR 109 CE2 Distance: 4.960679 - Hydrophobic, 96 - A PHE 486 CZ VS H TYR 109 CE1 Distance: 5.459323 - Hydrophobic, 97 - A TYR 489 CD1 VS H PHE 102 CB Distance: 4.401703 - Hydrophobic, 98 - A TYR 489 CE1 VS H PHE 102 CB Distance: 4.055539 - Hydrophobic, 99 - A TYR 489 CE1 VS H PHE 102 CG Distance: 5.350196 - Hydrophobic, 100 - A TYR 489 OH VS H PHE 102 O Distance: 3.572628 - Hydrogen Bonds, 101 - A TYR 489 CB VS H TYR 103 CB Distance: 4.815031 - Hydrophobic, 102 - A TYR 489 CB VS H TYR 103 CG Distance: 5.167160 - Hydrophobic, 103 - A TYR 489 CB VS H TYR 103 CD1 Distance: 4.543155 - Hydrophobic, 104 - A TYR 489 CB VS H TYR 103 CE1 Distance: 5.434220 - Hydrophobic, 105 - A TYR 489 CG VS H TYR 103 CB Distance: 3.926019 - Hydrophobic, 106 - A TYR 489 CG VS H TYR 103 CG Distance: 4.669964 - Hydrophobic, 107 - A TYR 489 CG VS H TYR 103 CG Distance: 5.807060 - Aromatic Stacking, 108 - A TYR 489 CG VS H TYR 103 CD1 Distance: 4.404135 - Hydrophobic, 109 - A TYR 489 CD1 VS H TYR 103 CB Distance: 3.913288 - Hydrophobic, 110 - A TYR 489 CD1 VS H TYR 103 CG Distance: 4.771066 - Hydrophobic, 111 - A TYR 489 CD1 VS H TYR 103 CD1 Distance: 4.558193 - Hydrophobic, 112 - A TYR 489 CD2 VS H TYR 103 CB Distance: 3.782819 - Hydrophobic, 113 - A TYR 489 CD2 VS H TYR 103 CG Distance: 4.727036 - Hydrophobic, 114 - A TYR 489 CD2 VS H TYR 103 CD1 Distance: 4.784116 - Hydrophobic, 115 - A TYR 489 CE1 VS H TYR 103 CB Distance: 3.772906 - Hydrophobic, 116 - A TYR 489 CE1 VS H TYR 103 CG Distance: 4.939014 - Hydrophobic, 117 - A TYR 489 CE1 VS H TYR 103 CD1 Distance: 5.076733 - Hydrophobic, 118 - A TYR 489 CE2 VS H TYR 103 CB Distance: 3.631139 - Hydrophobic, 119 - A TYR 489 CE2 VS H TYR 103 CG Distance: 4.886335 - Hydrophobic, 120 - A TYR 489 CE2 VS H TYR 103 CD1 Distance: 5.267858 - Hydrophobic, 121 - A TYR 489 OH VS H TYR 103 N Distance: 4.440426 - Hydrogen Bonds, 122 - A TYR 489 OH VS H TYR 103 O Distance: 4.847561 - Hydrogen Bonds, 123 - A PHE 490 CB VS H ILE 54 CG2 Distance: 4.380857 - Hydrophobic, 124 - A PHE 490 CG VS H ILE 54 CB Distance: 5.325267 - Hydrophobic, 125 - A PHE 490 CG VS H ILE 54 CG1 Distance: 5.177580 - Hydrophobic, 126 - A PHE 490 CG VS H ILE 54 CG2 Distance: 4.238097 - Hydrophobic, 127 - A PHE 490 CD1 VS H ILE 54 CG2 Distance: 5.252987 - Hydrophobic, 128 - A PHE 490 CD2 VS H ILE 54 CB Distance: 4.418617 - Hydrophobic, 129 - A PHE 490 CD2 VS H ILE 54 CG1 Distance: 3.992346 - Hydrophobic, 130 - A PHE 490 CD2 VS H ILE 54 CG2 Distance: 3.609538 - Hydrophobic, 131 - A PHE 490 CD2 VS H ILE 54 CD1 Distance: 5.308308 - Hydrophobic, 132 - A PHE 490 CE2 VS H ILE 54 CB Distance: 4.652300 - Hydrophobic, 133 - A PHE 490 CE2 VS H ILE 54 CG1 Distance: 3.973542 - Hydrophobic, 134 - A PHE 490 CE2 VS H ILE 54 CG2 Distance: 4.209596 - Hydrophobic, 135 - A PHE 490 CE2 VS H ILE 54 CD1 Distance: 5.079562 - Hydrophobic, 136 - A PHE 490 CZ VS H ILE 54 CG1 Distance: 5.144808 - Hydrophobic, 137 - A PHE 490 CZ VS H ILE 54 CG2 Distance: 5.229448 - Hydrophobic, 138 - A LEU 492 CB VS H ILE 54 CG1 Distance: 5.123677 - Hydrophobic, 139 - A LEU 492 CB VS H ILE 54 CD1 Distance: 5.488814 - Hydrophobic, 140 - A GLN 493 OE1 VS H THR 30 OG1 Distance: 2.888011 - Hydrogen Bonds, 141 - A GLN 493 NE2 VS H THR 30 O Distance: 2.939393 - Hydrogen Bonds, 142 - A GLN 493 NE2 VS H THR 30 OG1 Distance: 4.675273 - Hydrogen Bonds, 143 - A GLN 493 OE1 VS H GLY 31 N Distance: 4.060720 - Hydrogen Bonds, 144 - A GLN 493 NE2 VS H GLY 31 O Distance: 4.738042 - Hydrogen Bonds, 145 - A GLN 493 CB VS H ILE 54 CG1 Distance: 5.253064 - Hydrophobic, 146 - A GLN 493 CB VS H ILE 54 CD1 Distance: 5.228299 - Hydrophobic, 147 - A GLN 493 CG VS H ILE 54 CD1 Distance: 5.400219 - Hydrophobic, 148 - A GLN 493 NE2 VS H TYR 103 OH Distance: 3.039729 - Hydrogen Bonds, 149 - A SER 494 N VS H THR 30 OG1 Distance: 4.074944 - Hydrogen Bonds, 150 - A SER 494 O VS H THR 30 OG1 Distance: 4.160746 - Hydrogen Bonds, 151 - A SER 494 OG VS H THR 30 OG1 Distance: 4.405295 - Hydrogen Bonds, 152 - A GLY 496 N VS H THR 28 OG1 Distance: 4.152004 - Hydrogen Bonds, 153 - A GLY 496 O VS H THR 28 OG1 Distance: 4.534377 - Hydrogen Bonds,