5D94-B-A

PDB Title CRYSTAL STRUCTURE OF LC3-LIR PEPTIDE COMPLEX
Resolution (Å) 1.530
Classification PROTEIN BINDING/PEPTIDE

Protein

Description Microtubule-associated proteins 1A/1B light chain 3B
Organism Homo sapiens
Chain A
Length 119
Binding Area (Å2) 664.63
Molecular Weight 14057.14
Aromaticity 0.09
Instability 58.18
Isoelectric Point 9.22
Sequence KTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETFGMKL

Peptide

Description Peptide from FYVE and coiled-coil domain-containing protein 1
Organism Homo sapiens
Chain B
Length 12
Binding Area (Å2) 807.59
Hydrophobic (% a.a.)
50%
Molecular Weight 1379.46
Aromaticity 0.08
Instability 46.62
Isoelectric Point 3.33
Sequence DAVFDIITDEEL

Clustering Classification

Sequence cluster S 66
Contact cluster C78
Interface cluster I39

Similar complexes

Is the complex classified in the same cluster?

Complex Sequence cluster
(S66) 		Contact cluster
(C78) 		Interface cluster
(I39)
5cx3-H-D
5wrd-C-A
5cx3-F-B
5cx3-G-C
5yis-D-B
2zjd-B-A
2zjd-D-C
5cx3-E-A
5dpw-H-G
5dpw-J-I
5dpw-N-M
5e6o-G-C
5e6o-H-A
2k6q-B-A
3ll8-E-A