5KWN-U-A

PDB Title THE WD DOMAIN OFARABIDOPSIS THALIANA E3 UBIQUITIN LIGASE COP1 IN COMPLEX WITH PEPTIDE FROM HY5
Resolution (Å) 1.420
Classification LIGASE/PEPTIDE

Protein

Description E3 ubiquitin-protein ligase COP1
Organism Arabidopsis thaliana
Chain A
Length 306
Binding Area (Å2) 607.23
Molecular Weight 34718.79
Aromaticity 0.10
Instability 51.47
Isoelectric Point 6.67
Sequence FTRYSRLRVIAEIRHNIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVYHKEITRPVTSHRFGYFISAVCWKSDSPTMLTANSQGTIKVLVLAA

Peptide

Description peptide 16-mer
Organism Arabidopsis
Chain U
Length 9
Binding Area (Å2) 825.85
Hydrophobic (% a.a.)
44%
Molecular Weight 1174.31
Aromaticity 0.11
Instability 170.87
Isoelectric Point 4.79
Sequence EEIRRVPEF

Clustering Classification

Sequence cluster S 290
Contact cluster C62
Interface cluster I102

Similar complexes

Is the complex classified in the same cluster?

Complex Sequence cluster
(S290) 		Contact cluster
(C62) 		Interface cluster
(I102)
6qtt-B-A
6qtu-B-A
6qtv-B-A
6qtw-B-A
6qtx-B-A
5igo-W-C
5igo-X-D
6qto-B-A
6qtr-B-A
6qtq-B-A
6qts-B-A