Seattle Childrens Research Institute, Center for Global Infectious Disease Research, Seattle, USA.|Department of Biology, Humboldt-University Berlin, Institute for Theoretical Biology, Berlin, Germany.|Auckland Bioengineering Institute, University of Auckland, Auckland, NZ.|School of Computing and Mathematics, Keele University, Keele, UK.|Auckland Bioengineering Institute, University of Auckland, Auckland, NZ.|Computational Systems Biology of Infection and Antimicrobial-Resistant Pathogens, Center for Bioinformatics Txc3xbcbingen (ZBIT), University of Txc3xbcbingen, Txc3xbcbingen, Germany.|Auckland Bioengineering Institute, University of Auckland, Auckland, NZ.|European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, UK.|Auckland Bioengineering Institute, University of Auckland, Auckland, NZ.|Department of Physiology and Biophysics, University of Washington, Seattle, WA, USA.|School of Mathematical and Statistical Sciences, Arizona State University, Tempe, USA.|German Federal Institute for Risk Assessment, Berlin, Germany.|Opto-Knowledge Systems, Inc. (OKSI), Torrance, CA, USA.|Auckland Bioengineering Institute, University of Auckland, Auckland, NZ.|Department of Biomedical Informatics and Medical Education, University of Washington, Seattle, WA, USA.|Department of Neuroscience, Physiology and Pharmacology, University College London, London, UK.|Heidelberg Institute for Theoretical Studies (HITS gGmbH), Heidelberg, Germany.|Department of Computing and Mathematical Sciences, California Institute of Technology, Pasadena, CA, USA.|European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, UK.|Department of Electrical and Computer Engineering, University of Utah, Salt Lake City, UT, USA.|Systems Bioinformatics, Vrije Universiteit Amsterdam, Amsterdam, The Netherlands.|Department of Bioengineering, University of Washington, Seattle, WA, USA.|Department of Systems Biology and Bioinformatics, University of Rostock, Rostock, Germany.|Department of Biochemistry, Stellenbosch University, Matieland, South Africa.|Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway.|School of Computing Science, Newcastle University, Newcastle upon Tyne, UK.|Department of Systems Biology and Bioinformatics, University of Rostock, Rostock, Germany.|Department of Systems Biology and Bioinformatics, University of Rostock, Rostock, Germany.